Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G295900.1 | Wheat | extracellular, plasma membrane, vacuole | 52.5 | 75.68 |
| TraesCS4B01G017900.1 | Wheat | extracellular | 49.06 | 73.02 |
| HORVU6Hr1G044850.1 | Barley | extracellular | 16.56 | 66.25 |
| HORVU4Hr1G002770.4 | Barley | extracellular | 33.75 | 54.0 |
| EES12221 | Sorghum | extracellular | 36.56 | 53.67 |
| Zm00001d003600_P001 | Maize | extracellular | 34.06 | 50.23 |
| Zm00001d025467_P001 | Maize | cytosol, mitochondrion, plasma membrane | 23.44 | 45.73 |
| Os03t0663900-00 | Rice | extracellular | 30.0 | 36.5 |
| HORVU4Hr1G002310.1 | Barley | peroxisome, plasma membrane | 24.06 | 23.12 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G002780.1 | EnsemblPlantsGene:HORVU4Hr1G002780 | Gene3D:1.10.110.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | PFAM:PF14368 | SEG:seg | SUPFAM:SSF47699 | TMHMM:TMhelix |
| UniParc:UPI000B4872B4 | UniProt:A0A287MXR5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:5321736..5324281
Molecular Weight (calculated)
32836.4 Da
IEP (calculated)
9.653
GRAVY (calculated)
-0.118
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: KTKKRAFSFS SRAPEEHQKG HPPTLTYRPR TRAATSGPST WAAGRSIPEL TGRIERAARP RLLRLYNPPP TPLPSGVPPE PSSLHRTTTT TAPKTLGSER
101: AHLAPPMERS RRLLLVAGLL AALLPAAAAT FGLQQGAQCD PTFLATQAAL FCAPDMPTAQ CCEPVVAAFD LGGGVPCLCR VAAEPQLVMA GLNATHLFAL
201: YTSCGGIRPG GAHLAAACQG PAPPAAVVSS PPPPSPAPRR KQAAHDAPPP PPSSEKPSPP PQEHDGAAHA KSAPALAAPT PLAPAAATAP PPEAPHSAAS
301: SSDSAFIFIA AAMLAIYIVL
101: AHLAPPMERS RRLLLVAGLL AALLPAAAAT FGLQQGAQCD PTFLATQAAL FCAPDMPTAQ CCEPVVAAFD LGGGVPCLCR VAAEPQLVMA GLNATHLFAL
201: YTSCGGIRPG GAHLAAACQG PAPPAAVVSS PPPPSPAPRR KQAAHDAPPP PPSSEKPSPP PQEHDGAAHA KSAPALAAPT PLAPAAATAP PPEAPHSAAS
301: SSDSAFIFIA AAMLAIYIVL
001: MNSNSFLISA ALIFSLLSSN SPTSILAQIN TPCSPSMLSS VTGCTSFLTG GGSFPTSDCC GALKSLTGTG MDCLCLIVTA GVPISIPINR TLAISLPRAC
101: GIPGVPVQCK ASAAPLPTPG PASFGPTTSP TDSQTSDPEG SASFRPPTSP TTSQTPNDKD LSGSGNGGDP MGFAPPPPSS SPSSSHSLKL SYLLFAFAFT
201: IIKFI
101: GIPGVPVQCK ASAAPLPTPG PASFGPTTSP TDSQTSDPEG SASFRPPTSP TTSQTPNDKD LSGSGNGGDP MGFAPPPPSS SPSSSHSLKL SYLLFAFAFT
201: IIKFI
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G2Y5]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.