CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003600_P001	Maize	extracellular	77.06	77.42
Zm00001d025467_P001	Maize	cytosol, mitochondrion, plasma membrane	44.5	59.15
TraesCS4A01G295900.1	Wheat	extracellular, plasma membrane, vacuole	51.38	50.45
TraesCS4B01G017900.1	Wheat	extracellular	49.08	49.77
HORVU4Hr1G002780.1	Barley	plastid	53.67	36.56
Os03t0663900-00	Rice	extracellular	41.28	34.22

Protein Annotations

EnsemblPlants:EES12221	EnsemblPlantsGene:SORBI_3006G089700	EntrezGene:8075844	Gene3D:1.10.110.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	PFAM:PF14368	ProteinID:EES12221	ProteinID:EES12221.1
RefSeq:XP_002447893.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF47699	TMHMM:TMhelix	UniParc:UPI0001A87200
UniProt:C5Y8V1	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:45983685..45985997

Molecular Weight (calculated)

21889.7 Da

IEP (calculated)

7.477

GRAVY (calculated)

0.339

Length

218 amino acids

Sequence
(BLAST)

001: MERRLHHLAL LLGLLAWAAA AATTGAEAQP AVCDPSIIAT QIALFCMPDM PTAPCCEPII ASVDLGGGIP CLCRVAAQPQ LVLARLNATH LLALYASCGG
101: QHTGGAHLAA ACQGPSPPAA TIPVIAPPPP AAPRHKQPTR EAPPPPLRGE KPSPSPQQQP GAAAAHGKAI PASPAASFSQ LAPAAAPTTP TPPHSGSDPI
201: VASAALLVFF IAVLIILD

Best Arabidopsis Sequence Match ( AT2G48140.1 )
(BLAST)

001: MEGLTLIVVM MSSFMLGGQG QQISTPCTSS MISTFTPCLN FITGSSGGSV TPTAGCCDSL KTLTNTGMGC ACLILTANVP LPTGFINRTL ALALPRACKM
101: GGVPIQCQAA GTPLPAPGQV PFLIAPPPQV SAFSPGASKA AGTTPTQAPA PDTPADGPTG PTTKSGIRPV DQPMQPTGLA QSSTSPFLPL LFISLILLNL

Arabidopsis Description

EDA4At2g48140/F11L15.4 [Source:UniProtKB/TrEMBL;Acc:Q94AX3]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.