Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003600_P001 | Maize | extracellular | 60.37 | 45.62 |
| EES12221 | Sorghum | extracellular | 59.15 | 44.5 |
| TraesCS4B01G017900.1 | Wheat | extracellular | 40.85 | 31.16 |
| TraesCS4A01G295900.1 | Wheat | extracellular, plasma membrane, vacuole | 40.85 | 30.18 |
| Os03t0663900-00 | Rice | extracellular | 38.41 | 23.95 |
| HORVU4Hr1G002780.1 | Barley | plastid | 45.73 | 23.44 |
Protein Annotations
| EnsemblPlants:Zm00001d025467_P001 | EnsemblPlants:Zm00001d025467_T001 | EnsemblPlantsGene:Zm00001d025467 | Gene3D:1.10.110.10 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | PFAM:PF14368 | ProteinID:AQK43807.1 | SEG:seg |
| SUPFAM:SSF47699 | TMHMM:TMhelix | UniParc:UPI000842E82B | UniProt:A0A1D6J7A8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr10:-:119825127..119826659
Molecular Weight (calculated)
16831.5 Da
IEP (calculated)
7.135
GRAVY (calculated)
0.115
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDMPTAPCC EPIIASIDLG GGVPCLCRVA AQPQLVLARL NATHHLALYA SCGGQHTMGA HLAAACQQAP SPPATVLVLA PPPPQAANTR DDPSPAAAEQ
101: EAVPYRGHRR RPRPGQPHAS PAAAPTMPPP PPPHSGSDKG CVVVVSAALE LVFFVMAGIV FVLE
101: EAVPYRGHRR RPRPGQPHAS PAAAPTMPPP PPPHSGSDKG CVVVVSAALE LVFFVMAGIV FVLE
001: MTKTMMIFAA AMTVMALLLV PTIEAQTECV SKLVPCFNDL NTTTTPVKEC CDSIKEAVEK ELTCLCTIYT SPGLLAQFNV TTEKALGLSR RCNVTTDLSA
101: CTAKGAPSPK ASLPPPAPAG NTKKDAGAGN KLAGYGVTTV ILSLISSIFF
101: CTAKGAPSPK ASLPPPAPAG NTKKDAGAGN KLAGYGVTTV ILSLISSIFF
Arabidopsis Description
At1g62790 [Source:UniProtKB/TrEMBL;Acc:Q6NLF7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.