Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G017900.1 | Wheat | extracellular | 86.49 | 89.3 |
| HORVU4Hr1G002780.1 | Barley | plastid | 75.68 | 52.5 |
| EES12221 | Sorghum | extracellular | 50.45 | 51.38 |
| Zm00001d003600_P001 | Maize | extracellular | 49.55 | 50.69 |
| Zm00001d025467_P001 | Maize | cytosol, mitochondrion, plasma membrane | 30.18 | 40.85 |
| Os03t0663900-00 | Rice | extracellular | 47.3 | 39.92 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G295900.1 | EnsemblPlantsGene:TraesCS4A01G295900 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4A:+:596297994..596300601
Molecular Weight (calculated)
21963.6 Da
IEP (calculated)
7.408
GRAVY (calculated)
0.218
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSRRLLLV AGLLAALLPA AAAAFGQQPG APCEPTLLAT QVALFCAPDM PTAQCCEPVV AAVDLGGGVP CLCRVAAEPQ LVMAGLNATH LLTLYSSCGG
101: LRPGGAHLAA ACEGPAPPAA VVSSPPPPPP STAPRRKQPA HDAPPPPPPS SDKPSSPPPS QEHDGAAPHA KAAPAQAATS PLAPAAAIAP PPQAPHSAAP
201: TASSKAAFFF VATAMLGLYI IL
101: LRPGGAHLAA ACEGPAPPAA VVSSPPPPPP STAPRRKQPA HDAPPPPPPS SDKPSSPPPS QEHDGAAPHA KAAPAQAATS PLAPAAAIAP PPQAPHSAAP
201: TASSKAAFFF VATAMLGLYI IL
001: MNSNSFLISA ALIFSLLSSN SPTSILAQIN TPCSPSMLSS VTGCTSFLTG GGSFPTSDCC GALKSLTGTG MDCLCLIVTA GVPISIPINR TLAISLPRAC
101: GIPGVPVQCK ASAAPLPTPG PASFGPTTSP TDSQTSDPEG SASFRPPTSP TTSQTPNDKD LSGSGNGGDP MGFAPPPPSS SPSSSHSLKL SYLLFAFAFT
201: IIKFI
101: GIPGVPVQCK ASAAPLPTPG PASFGPTTSP TDSQTSDPEG SASFRPPTSP TTSQTPNDKD LSGSGNGGDP MGFAPPPPSS SPSSSHSLKL SYLLFAFAFT
201: IIKFI
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G2Y5]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.