Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G295900.1 | Wheat | extracellular, plasma membrane, vacuole | 89.3 | 86.49 |
| EES12221 | Sorghum | extracellular | 49.77 | 49.08 |
| HORVU4Hr1G002780.1 | Barley | plastid | 73.02 | 49.06 |
| Zm00001d003600_P001 | Maize | extracellular | 48.84 | 48.39 |
| Zm00001d025467_P001 | Maize | cytosol, mitochondrion, plasma membrane | 31.16 | 40.85 |
| Os03t0663900-00 | Rice | extracellular | 48.84 | 39.92 |
| TraesCS4B01G029900.1 | Wheat | plasma membrane | 54.42 | 33.91 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G017900.1 | EnsemblPlantsGene:TraesCS4B01G017900 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr4B:-:13125606..13127461
Molecular Weight (calculated)
21009.4 Da
IEP (calculated)
6.642
GRAVY (calculated)
0.290
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSRGLLLV AGLLAALLPA AAAQPGAPCE PALLATQVAL FCAPDMPTAQ CCEPVVAAVD LGGGVPCLCR VAAEPQLVMA GLNATHLLTL YSSCGGLRPG
101: GAHLAAACEG PAPPAAVVSS PPPPPPPSAA PRHDAPPPPP PSSEKPSSPP PSQDHDGAAP RAKAAPAQAA TSTLAPAAAA TAPPPQAPHS AAPTAPSKAA
201: FFFVATAMLG LYIIL
101: GAHLAAACEG PAPPAAVVSS PPPPPPPSAA PRHDAPPPPP PSSEKPSSPP PSQDHDGAAP RAKAAPAQAA TSTLAPAAAA TAPPPQAPHS AAPTAPSKAA
201: FFFVATAMLG LYIIL
001: MNSNSFLISA ALIFSLLSSN SPTSILAQIN TPCSPSMLSS VTGCTSFLTG GGSFPTSDCC GALKSLTGTG MDCLCLIVTA GVPISIPINR TLAISLPRAC
101: GIPGVPVQCK ASAAPLPTPG PASFGPTTSP TDSQTSDPEG SASFRPPTSP TTSQTPNDKD LSGSGNGGDP MGFAPPPPSS SPSSSHSLKL SYLLFAFAFT
201: IIKFI
101: GIPGVPVQCK ASAAPLPTPG PASFGPTTSP TDSQTSDPEG SASFRPPTSP TTSQTPNDKD LSGSGNGGDP MGFAPPPPSS SPSSSHSLKL SYLLFAFAFT
201: IIKFI
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G2Y5]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.