Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G195100.1 Wheat mitochondrion, plastid 89.79 95.42
TraesCS4B01G194400.2 Wheat mitochondrion, plastid 89.47 95.08
TraesCS4A01G109900.1 Wheat mitochondrion, plastid 88.52 93.91
Os03t0291500-01 Rice plasma membrane 82.46 85.6
Zm00001d028750_P002 Maize extracellular 79.74 85.03
KXG39588 Sorghum mitochondrion 78.95 83.9
Zm00001d047736_P001 Maize cytosol 71.13 78.38
HORVU3Hr1G013910.4 Barley cytosol 63.96 69.02
HORVU1Hr1G092110.4 Barley cytosol, plastid 63.8 62.89
HORVU5Hr1G048100.9 Barley mitochondrion, plastid 59.01 61.67
HORVU1Hr1G084370.2 Barley plastid 63.16 60.27
Protein Annotations
KEGG:00250+6.3.5.4Gene3D:3.40.50.620Gene3D:3.60.20.10MapMan:4.1.2.1.1UniProt:A0A287P6Q4InterPro:AsnB_N
InterPro:Asn_synth_AEBInterPro:Asn_synthaseInterPro:GATase_2_domGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004066GO:GO:0005488GO:GO:0005524GO:GO:0006529GO:GO:0006541GO:GO:0008150
GO:GO:0008152GO:GO:0008652GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:HORVU4Hr1G056240EnsemblPlants:HORVU4Hr1G056240.2
InterPro:IPR014729InterPro:IPR017932InterPro:IPR029055InterPro:Ntn_hydrolases_NPFAM:PF00733PFAM:PF13537
PIRSF:PIRSF001589PFscan:PS51278PANTHER:PTHR11772PANTHER:PTHR11772:SF16InterPro:Rossmann-like_a/b/a_foldSUPFAM:SSF52402
SUPFAM:SSF56235TIGRFAMs:TIGR01536UniParc:UPI000B46EC17SEG:seg::
Description
No Description!
Coordinates
chrchr4H:+:472366035..472369874
Molecular Weight (calculated)
69886.8 Da
IEP (calculated)
6.469
GRAVY (calculated)
-0.293
Length
627 amino acids
Sequence
(BLAST)
001: LSLSLSLNTS IIHSSFLFFN LIRPPNPASS VAASTMCGIL AVLGCADSSQ AKRARVLSCS RRLKHRGPDW SGLFQCEGNF LAQQRLAVVS PLSGDQPLYN
101: EDRTVVVVAN GEIYNHKKIR KQFAAKHTFT TGSDCEVIIP LYEEYGENFV NMLDGVFSFV LYDTRNKTYM AARDAVGVNP LYFGRGSDGS VWIASEMKAL
201: HEDCPTFELF PPGNLYSSAA GGFRRWYNPQ WFAEHVPATP YQPLVLREAF EKAVIKRLMT DVPFGVLLSG GLDSSLVASV TKRHLIETEA AKKFGTELHS
301: FVVGLEGSPD LKAAREVADY LGTIHHEFHF TVQDGIDAIE EVIYHNETYD VTTIRASTPM FLMARKIKAL GVKMVLSGEG SDELLGGYLY FHFAPNKEEF
401: HKETCRKVKA LHQYDCLRAN KATSAWGLEV RVPFLDKEFI DVAMSMDPEW KLYDADLGRI EKWVLRKAFD DEKEPYLPKH ILYRQKEQFS DGVGYNWIDG
501: LKAFTEQQVT DEMMKNATEE YPYNTPINKE AYYYRMIFER LYPQESARET VPWGPSIACS TPAAIEWVAQ WKASNDPSGR LIASHNDATP AHAHANGNGN
601: GAVANGKANG NGTANGNGNA NGTLVPC
Best Arabidopsis Sequence Match ( AT3G47340.1 )
(BLAST)
001: MCGILAVLGC SDDSQAKRVR VLELSRRLRH RGPDWSGLYQ NGDNYLAHQR LAVIDPASGD QPLFNEDKTI VVTVNGEIYN HEELRKRLKN HKFRTGSDCE
101: VIAHLYEEYG VDFVDMLDGI FSFVLLDTRD NSFMVARDAI GVTSLYIGWG LDGSVWISSE MKGLNDDCEH FETFPPGHFY SSKLGGFKQW YNPPWFNESV
201: PSTPYEPLAI RRAFENAVIK RLMTDVPFGV LLSGGLDSSL VASITARHLA GTKAAKQWGP QLHSFCVGLE GSPDLKAGKE VAEYLGTVHH EFHFSVQDGI
301: DAIEDVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGADEIFG GYLYFHKAPN KKEFHQETCR KIKALHKYDC LRANKSTSAF GLEARVPFLD
401: KDFINTAMSL DPESKMIKPE EGRIEKWVLR RAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAA QNVNDKMMSN AGHIFPHNTP NTKEAYYYRM
501: IFERFFPQNS ARLTVPGGAT VACSTAKAVE WDASWSNNMD PSGRAAIGVH LSAYDGKNVA LTIPPLKAID NMPMMMGQGV VIQS
Arabidopsis Description
ASN1DIN6 [Source:UniProtKB/TrEMBL;Acc:A0A178VBT4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.