CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028750_P002	Maize	extracellular	91.02	91.33
TraesCS4B01G194400.2	Wheat	mitochondrion, plastid	85.08	85.08
Zm00001d047736_P001	Maize	cytosol	82.03	85.06
TraesCS4D01G195100.1	Wheat	mitochondrion, plastid	84.07	84.07
TraesCS4A01G109900.1	Wheat	mitochondrion, plastid	83.22	83.08
Os03t0291500-01	Rice	plasma membrane	84.58	82.62
HORVU4Hr1G056240.2	Barley	plastid	83.9	78.95
EER89574	Sorghum	cytosol	68.14	68.02
EES09082	Sorghum	cytosol	66.27	65.82

Protein Annotations

KEGG:00250+6.3.5.4	Gene3D:3.40.50.620	Gene3D:3.60.20.10	MapMan:4.1.2.1.1	UniProt:A0A1B6QNT6	InterPro:AsnB_N
InterPro:Asn_synth_AEB	InterPro:Asn_synthase	InterPro:GATase_2_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004066	GO:GO:0005488	GO:GO:0005524	GO:GO:0006529	GO:GO:0006541	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	InterPro:IPR014729	InterPro:IPR017932
InterPro:IPR029055	EnsemblPlants:KXG39588	ProteinID:KXG39588	ProteinID:KXG39588.1	InterPro:Ntn_hydrolases_N	PFAM:PF00733
PFAM:PF13537	PIRSF:PIRSF001589	PFscan:PS51278	PANTHER:PTHR11772	PANTHER:PTHR11772:SF16	InterPro:Rossmann-like_a/b/a_fold
EnsemblPlantsGene:SORBI_3001G406800	SUPFAM:SSF52402	SUPFAM:SSF56235	TIGRFAMs:TIGR01536	UniParc:UPI0001C80B6C	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:69116259..69120681

Molecular Weight (calculated)

66267.4 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.309

Length

590 amino acids

Sequence
(BLAST)

001: MCGILAVLGC SDWSQARRAR VLACARRLKH RGPDWSGLYQ HEGNFLAQQR LAIVSPLSGD QPLFNEDRTV VVVANGEIYN HKNIRKQFTG THNFTTGSDC
101: EVIIPLYEKY GENFVDMLDG VFAFVLYDTR DRTYVAARDA IGVNPLYIGW GSDGSVWISS EMKALNEDCV RFEIFPPGHL YSSAAGGFRR WYNPQWFQEQ
201: VPRTAPYQPL VLRDAFEKAV IKRLMTDVPF GVLLSGGLDS SLVASVTKRH LVKTEAAEKF GTELHSFVVG LEGSPDLKAA REVADYLGTI HHEFHFTVQD
301: GIDAIEEVIY HDETYDVTTI RASTPMFLMA RKIKSLGVKM VLSGEGSDEL LGGYLYFHFA PNKEEFHKET CRKVKALHQY DCLRANKATS AWGLEVRVPF
401: LDKEFINVAM SMDPEWKMYD KNLGRIEKWV MRKAFDDEEN PYLPKHILYR QKEQFSDGVG YNWIDGLKAF TEQQVTDEMM SNAAQTFPYN TPVNKEAYYY
501: RMIFERLFPQ DSARETVPWG PSIACSTPAA IEWVEQWKAS NDPSGRFISS HDSATDNTGG GKLAVVANGG HGAANGTVNG GNDVAVAIAV

Best Arabidopsis Sequence Match ( AT3G47340.1 )
(BLAST)

001: MCGILAVLGC SDDSQAKRVR VLELSRRLRH RGPDWSGLYQ NGDNYLAHQR LAVIDPASGD QPLFNEDKTI VVTVNGEIYN HEELRKRLKN HKFRTGSDCE
101: VIAHLYEEYG VDFVDMLDGI FSFVLLDTRD NSFMVARDAI GVTSLYIGWG LDGSVWISSE MKGLNDDCEH FETFPPGHFY SSKLGGFKQW YNPPWFNESV
201: PSTPYEPLAI RRAFENAVIK RLMTDVPFGV LLSGGLDSSL VASITARHLA GTKAAKQWGP QLHSFCVGLE GSPDLKAGKE VAEYLGTVHH EFHFSVQDGI
301: DAIEDVIYHV ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGADEIFG GYLYFHKAPN KKEFHQETCR KIKALHKYDC LRANKSTSAF GLEARVPFLD
401: KDFINTAMSL DPESKMIKPE EGRIEKWVLR RAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAA QNVNDKMMSN AGHIFPHNTP NTKEAYYYRM
501: IFERFFPQNS ARLTVPGGAT VACSTAKAVE WDASWSNNMD PSGRAAIGVH LSAYDGKNVA LTIPPLKAID NMPMMMGQGV VIQS

Arabidopsis Description

ASN1DIN6 [Source:UniProtKB/TrEMBL;Acc:A0A178VBT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.