Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G200500.1 | Wheat | nucleus | 95.0 | 95.0 |
TraesCS5A01G201900.1 | Wheat | cytosol, nucleus, plastid | 94.17 | 94.17 |
TraesCS5D01G208200.1 | Wheat | nucleus | 88.33 | 88.33 |
Os08t0366200-01 | Rice | cytosol, nucleus, plastid | 55.0 | 45.83 |
Zm00001d020364_P001 | Maize | nucleus | 46.67 | 39.16 |
HORVU4Hr1G030640.1 | Barley | cytosol | 41.67 | 37.31 |
KXG35568 | Sorghum | mitochondrion | 47.5 | 27.54 |
Protein Annotations
EMBL:AK359156 | EnsemblPlants:HORVU5Hr1G060000.1 | EnsemblPlantsGene:HORVU5Hr1G060000 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
PANTHER:PTHR33469 | PANTHER:PTHR33469:SF4 | PFAM:PF07011 | SEG:seg | UniParc:UPI0001B06F10 | UniProt:F2D5J6 |
MapMan:27.1.6.3.3 | : | : | : | : | : |
Description
ELF4-like protein [Source:UniProtKB/TrEMBL;Acc:F2D5J6]
Coordinates
chrchr5H:-:469024048..469025518
Molecular Weight (calculated)
12602.8 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.321
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSSGREVV PNGGAAEGMG NGAANGRAVQ ALQRSFAEVQ VILEKNRILI QEITQNQESL EAGGLSRNVA LIRELNSNIA RVVDLYNALS CSFSSSLTNG
101: SAPAASDAAK GAYKRPRPTQ
101: SAPAASDAAK GAYKRPRPTQ
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
101: RGNRRIRPA
Arabidopsis Description
EFL3Protein ELF4-LIKE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.