Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G060000.1 | Barley | nucleus | 45.83 | 55.0 |
| TraesCS5B01G200500.1 | Wheat | nucleus | 43.75 | 52.5 |
| TraesCS5D01G208200.1 | Wheat | nucleus | 43.75 | 52.5 |
| TraesCS5A01G201900.1 | Wheat | cytosol, nucleus, plastid | 43.06 | 51.67 |
| Zm00001d020364_P001 | Maize | nucleus | 50.0 | 50.35 |
| Os03t0410300-01 | Rice | cytosol | 34.72 | 43.86 |
| Os11t0621500-01 | Rice | nucleus | 34.72 | 42.73 |
| KXG35568 | Sorghum | mitochondrion | 52.78 | 36.72 |
Protein Annotations
| EnsemblPlants:Os08t0366200-01 | EnsemblPlantsGene:Os08g0366200 | EntrezGene:4345389 | GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 |
| PANTHER:PTHR33469 | PANTHER:PTHR33469:SF4 | PFAM:PF07011 | ProteinID:BAD03359.1 | ProteinID:BAF23562.1 | ProteinID:BAT05143.1 |
| ProteinID:EAZ42511.1 | RefSeq:XP_015650144.1 | SEG:seg | UniParc:UPI00002260C7 | UniProt:Q6ZAE1 | MapMan:27.1.6.3.3 |
Description
ELF4_chr.8Protein of unknown function DUF1313 family protein. (Os08t0366200-01)
Coordinates
chr8:+:16988501..16991352
Molecular Weight (calculated)
14788.0 Da
IEP (calculated)
5.210
GRAVY (calculated)
-0.401
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDSVISNG GREEEVVVAN GSGGGVGGTA RSSGGGGGKV VQVLQRNFGE VQGILEQNRV LIQEISQNHE ARDADGLTRN VALIRELNTN IARVVDLYAN
101: LSGSFSRSVT AAASANNTNA TNSTSPSAAA AAKASKRSRA TDTE
101: LSGSFSRSVT AAASANNTNA TNSTSPSAAA AAKASKRSRA TDTE
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Arabidopsis Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.