Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0366200-01 | Rice | cytosol, nucleus, plastid | 50.35 | 50.0 |
| TraesCS5D01G208200.1 | Wheat | nucleus | 40.56 | 48.33 |
| KXG35568 | Sorghum | mitochondrion | 69.93 | 48.31 |
| HORVU5Hr1G060000.1 | Barley | nucleus | 39.16 | 46.67 |
| TraesCS5A01G201900.1 | Wheat | cytosol, nucleus, plastid | 39.16 | 46.67 |
| TraesCS5B01G200500.1 | Wheat | nucleus | 39.16 | 46.67 |
| Zm00001d047269_P001 | Maize | cytosol | 35.66 | 43.22 |
| Zm00001d048801_P001 | Maize | cytosol | 36.36 | 40.31 |
Protein Annotations
| EMBL:BT041673 | EMBL:EU916978 | EnsemblPlants:Zm00001d020364_P001 | EnsemblPlants:Zm00001d020364_T001 | EnsemblPlantsGene:Zm00001d020364 | EntrezGene:100284193 |
| GO:GO:0008150 | GO:GO:0042753 | InterPro:EARLY_FLOWERING_4 | PANTHER:PTHR33469 | PANTHER:PTHR33469:SF4 | PFAM:PF07011 |
| ProteinID:ONM54792.1 | SEG:seg | UniParc:UPI00017B763B | UniProt:B4FX35 | MapMan:27.1.6.3.3 | : |
Description
Protein EARLY FLOWERING 4
Coordinates
chr7:+:109507759..109509454
Molecular Weight (calculated)
14568.9 Da
IEP (calculated)
6.537
GRAVY (calculated)
-0.539
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDGGSGSD SMEFVAGAET SAGAGTNAGR NRGVGAGTSV GGGGGTKLPH VLQKSFGEVQ GILEHNRVLI QEISQNQETR DADGLSRNVA LIRELNTNIA
101: RVVDLYGDMS GSFARAVAAK KDAAGDKSGP KRPRSAGAGG QQQ
101: RVVDLYGDMS GSFARAVAAK KDAAGDKSGP KRPRSAGAGG QQQ
001: MEGDVLSGFG DRHNMDGKLL QSFQKSFVDV QDILDQNRLL INEINQNHES KQPDNLGRNV GLIKELNNNI RRVASLYGDL SHSFARSVDA SSEGESSGTL
101: KSDGKANQKR FRSG
101: KSDGKANQKR FRSG
Arabidopsis Description
EFL4ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.