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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome
Any Predictor:mitochondrion, peroxisome, plastid, secretory
iPSORT:plastid
MultiLoc:peroxisome
Predotar:secretory
TargetP:mitochondrion
WoLF PSORT:peroxisome
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G002460.1 Barley endoplasmic reticulum, golgi 57.99 92.74
TraesCS2B01G003400.1 Wheat golgi 90.53 90.53
TraesCS2B01G002900.1 Wheat endoplasmic reticulum 90.34 90.34
TraesCS2B01G003200.1 Wheat endoplasmic reticulum 89.94 89.94
TraesCS2D01G015000.1 Wheat endoplasmic reticulum 88.95 88.09
HORVU3Hr1G011850.4 Barley golgi, mitochondrion, peroxisome 76.13 73.81
HORVU3Hr1G011820.3 Barley golgi 74.36 73.63
HORVU7Hr1G107280.1 Barley golgi 74.75 73.45
HORVU3Hr1G011860.1 Barley peroxisome 74.16 73.01
HORVU2Hr1G003400.7 Barley endoplasmic reticulum 74.36 71.81
HORVU3Hr1G011870.4 Barley golgi 72.39 71.4
HORVU2Hr1G003450.4 Barley endoplasmic reticulum, extracellular 73.77 71.37
HORVU1Hr1G001150.1 Barley endoplasmic reticulum, golgi 64.5 62.64
HORVU0Hr1G006170.5 Barley peroxisome 56.41 60.72
Zm00001d003142_P001 Maize mitochondrion 58.97 58.86
EES11071 Sorghum extracellular, golgi, mitochondrion 59.76 54.59
Zm00001d003140_P001 Maize endoplasmic reticulum, golgi, mitochondrion, plastid 57.59 53.97
Zm00001d003144_P001 Maize endoplasmic reticulum, golgi, plastid 57.0 53.52
Os11t0465200-01 Rice endoplasmic reticulum 52.47 51.85
Zm00001d029184_P001 Maize endoplasmic reticulum, plastid 50.1 51.73
OQU92584 Sorghum cytosol 53.85 51.41
HORVU2Hr1G103760.6 Barley endoplasmic reticulum, golgi 46.35 51.31
HORVU2Hr1G006830.7 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 35.9 50.14
HORVU5Hr1G112130.1 Barley endoplasmic reticulum, plasma membrane 52.66 49.17
HORVU6Hr1G024850.2 Barley golgi 51.48 48.97
HORVU2Hr1G006910.14 Barley endoplasmic reticulum, golgi 51.87 48.88
HORVU2Hr1G006850.2 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 51.08 48.5
HORVU2Hr1G025480.2 Barley endoplasmic reticulum 49.7 48.18
HORVU1Hr1G007790.1 Barley endoplasmic reticulum 48.72 47.78
HORVU1Hr1G007840.2 Barley endoplasmic reticulum, extracellular 47.93 47.46
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 30.57 42.58
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 33.73 41.91
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 37.28 40.73
HORVU3Hr1G031020.1 Barley endoplasmic reticulum, golgi 41.42 40.7
HORVU3Hr1G112810.2 Barley endoplasmic reticulum, plastid 39.25 38.87
HORVU3Hr1G030950.1 Barley endoplasmic reticulum 40.24 38.64
HORVU5Hr1G081270.1 Barley endoplasmic reticulum, vacuole 38.26 38.57
HORVU1Hr1G045570.1 Barley endoplasmic reticulum, golgi 40.04 38.3
GSMUA_Achr11P... Banana mitochondrion 38.86 38.1
HORVU1Hr1G076710.1 Barley endoplasmic reticulum 38.46 37.94
HORVU1Hr1G045500.1 Barley endoplasmic reticulum 37.67 37.9
HORVU5Hr1G081260.1 Barley plastid 38.26 37.6
HORVU1Hr1G064990.5 Barley endoplasmic reticulum 40.04 37.25
HORVU3Hr1G031000.1 Barley endoplasmic reticulum 38.66 37.05
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 28.8 36.23
HORVU5Hr1G117710.1 Barley endoplasmic reticulum, golgi, plasma membrane 36.88 36.03
HORVU5Hr1G081250.2 Barley plastid 37.48 35.51
HORVU5Hr1G081210.1 Barley mitochondrion 37.28 34.68
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287S6P1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU5Hr1G088540EnsemblPlants:HORVU5Hr1G088540.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF183SUPFAM:SSF48264SignalP:SignalP-noTM
UniParc:UPI000B476BF4SEG:seg::::
Description
No Description!
Coordinates
chrchr5H:+:582037287..582039791
Molecular Weight (calculated)
56665.2 Da
IEP (calculated)
7.675
GRAVY (calculated)
0.014
Length
507 amino acids
Sequence
(BLAST)
001: MSWFLLLFPL SLLFVHYWFT GKTWKKQKHE AEDCLPLPPS PPALPIIGHL HLIGSLPHVS LRGLARRHGP DVILLRLGVV PTFVVSSARA AEAVLRTHDH
101: VMASRPRSLV NDIIMYGASD VAFAPYGEYW RQARKLATTH MLSAKKVQSF RGAIMEEVSA VMAKISDAPA VGGTVDMSEL LRSFAYDMAC RIVSGESSMK
201: EGRSKLCGEL ANDTSRLLGG FNVEEYFPIL TRVGVLKGAV CAKAERVRLR WADFLDKLID DNMSKGKSTF DHKGGNFLDI LLSAQEEYGL TRDHIKALLT
301: DVFFGLTSTS SNTLEFTLAE LMRRPSLMGK LQDEVRSIVP LGQETVIETD INKMAYLRAV IKESLRLYPV APFLPPHLAM GDCNIVGYMV PAGTHILVNV
401: WAIGRDSNSW EDAEEYIPER FIDEGNAVHV NFKGNDFQFL PFGAGRRMCP GINLGITNVE LMLANLIYHF DWELPVGVDR KDIDMAEVFG LTMRRKEKLL
501: LVPKSRM
Best Arabidopsis Sequence Match ( AT2G30770.1 )
(BLAST)
001: MEMILSISLC LTTLITLLLL RRFLKRTATK VNLPPSPWRL PVIGNLHQLS LHPHRSLRSL SLRYGPLMLL HFGRVPILVV SSGEAAQEVL KTHDHKFANR
101: PRSKAVHGLM NGGRDVVFAP YGEYWRQMKS VCILNLLTNK MVESFEKVRE DEVNAMIEKL EKASSSSSSE NLSELFITLP SDVTSRVALG RKHSEDETAR
201: DLKKRVRQIM ELLGEFPIGE YVPILAWIDG IRGFNNKIKE VSRGFSDLMD KVVQEHLEAS NDKADFVDIL LSIEKDKNSG FQVQRNDIKF MILDMFIGGT
301: STTSTLLEWT MTELIRSPKS MKKLQDEIRS TIRPHGSYIK EKEVENMKYL KAVIKEVLRL HPSLPMILPR LLSEDVKVKG YNIAAGTEVI INAWAIQRDT
401: AIWGPDAEEF KPERHLDSGL DYHGKNLNYI PFGSGRRICP GINLALGLAE VTVANLVGRF DWRVEAGPNG DQPDLTEAIG IDVCRKFPLI AFPSSVV
Arabidopsis Description
CYP71A13Indoleacetaldoxime dehydratase [Source:UniProtKB/Swiss-Prot;Acc:O49342]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.