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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G358200.1 Wheat endoplasmic reticulum 74.18 88.91
TraesCS5B01G514200.1 Wheat cytosol 48.17 83.89
TraesCS5D01G514700.1 Wheat endoplasmic reticulum, plastid 81.7 83.14
HORVU3Hr1G112810.2 Barley endoplasmic reticulum, plastid 73.99 75.0
HORVU1Hr1G045500.1 Barley endoplasmic reticulum 66.09 68.06
EES02205 Sorghum endoplasmic reticulum, extracellular 58.0 54.04
HORVU3Hr1G031000.1 Barley endoplasmic reticulum 54.72 53.69
HORVU3Hr1G030950.1 Barley endoplasmic reticulum 53.95 53.03
HORVU3Hr1G031020.1 Barley endoplasmic reticulum, golgi 51.45 51.74
HORVU1Hr1G045570.1 Barley endoplasmic reticulum, golgi 51.45 50.38
VIT_17s0000g09510.t01 Wine grape endoplasmic reticulum, golgi 37.96 43.11
GSMUA_Achr1P21270_001 Banana mitochondrion 28.13 42.82
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 35.45 42.69
HORVU5Hr1G081270.1 Barley endoplasmic reticulum, vacuole 41.23 42.54
Solyc03g111920.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 39.69 41.78
PGSC0003DMT400039354 Potato cytosol 34.68 41.67
Solyc03g112010.2.1 Tomato endoplasmic reticulum 39.88 41.57
Solyc03g111940.2.1 Tomato endoplasmic reticulum, plasma membrane 40.08 41.52
HORVU5Hr1G081260.1 Barley plastid 41.23 41.47
CDY48166 Canola cytosol 20.04 40.94
PGSC0003DMT400046722 Potato endoplasmic reticulum, plasma membrane 38.92 40.81
PGSC0003DMT400046711 Potato endoplasmic reticulum 39.31 40.8
PGSC0003DMT400039176 Potato cytosol 34.1 40.69
VIT_17s0000g09570.t01 Wine grape endoplasmic reticulum 40.08 40.55
KRH50004 Soybean golgi 39.11 40.44
PGSC0003DMT400046700 Potato endoplasmic reticulum 33.72 40.42
PGSC0003DMT400046718 Potato extracellular, plasma membrane 38.92 40.24
PGSC0003DMT400039185 Potato cytosol 32.56 40.24
Solyc03g111880.2.1 Tomato endoplasmic reticulum, golgi 40.46 40.23
PGSC0003DMT400039179 Potato cytosol 33.91 40.18
Solyc03g111950.2.1 Tomato endoplasmic reticulum, golgi 38.54 40.16
AT5G24960.1 Thale cress endoplasmic reticulum 38.34 40.04
PGSC0003DMT400039355 Potato endoplasmic reticulum, plasma membrane 38.34 40.04
Bra029898.1-P Field mustard mitochondrion 34.1 39.86
VIT_17s0000g09550.t01 Wine grape cytosol 22.35 39.86
PGSC0003DMT400046854 Potato cytosol 28.32 39.84
Solyc03g111990.2.1 Tomato endoplasmic reticulum, plasma membrane 38.73 39.8
PGSC0003DMT400046721 Potato endoplasmic reticulum, golgi 38.34 39.72
Solyc03g112030.1.1 Tomato endoplasmic reticulum 37.96 39.4
Solyc03g112040.1.1 Tomato endoplasmic reticulum 37.96 39.4
Solyc03g111930.2.1 Tomato endoplasmic reticulum 37.57 39.31
Bra029897.1-P Field mustard mitochondrion 33.53 39.19
Bra022813.1-P Field mustard mitochondrion, plastid 35.26 39.19
AT3G48280.1 Thale cress endoplasmic reticulum 36.99 39.18
KRH20487 Soybean endoplasmic reticulum, golgi 38.54 39.14
Solyc03g111970.2.1 Tomato endoplasmic reticulum, golgi 38.15 39.13
Bra018069.1-P Field mustard extracellular, golgi 23.51 39.1
KRH38549 Soybean endoplasmic reticulum 35.84 39.08
KRH38547 Soybean plastid 38.15 39.05
KRH40475 Soybean endoplasmic reticulum 39.11 39.04
HORVU3Hr1G011870.4 Barley golgi 38.54 38.91
HORVU2Hr1G103760.6 Barley endoplasmic reticulum, golgi 34.3 38.86
HORVU7Hr1G107280.1 Barley golgi 38.54 38.76
HORVU1Hr1G064990.5 Barley endoplasmic reticulum 40.46 38.53
PGSC0003DMT400046720 Potato endoplasmic reticulum, golgi 34.1 38.48
HORVU3Hr1G011820.3 Barley golgi 37.96 38.48
AT3G48270.1 Thale cress endoplasmic reticulum 36.22 38.45
HORVU3Hr1G011850.4 Barley golgi, mitochondrion, peroxisome 38.73 38.43
CDY23983 Canola extracellular, golgi 36.8 38.43
Bra019538.1-P Field mustard endoplasmic reticulum 35.84 38.43
AT3G48320.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 36.22 38.37
CDX68474 Canola endoplasmic reticulum, golgi 35.84 38.35
AT2G30750.1 Thale cress endoplasmic reticulum 36.61 38.23
AT3G48310.1 Thale cress endoplasmic reticulum 36.03 38.16
AT3G48300.2 Thale cress endoplasmic reticulum, golgi, plasma membrane 35.65 38.14
CDX83028 Canola endoplasmic reticulum, golgi 35.65 38.14
PGSC0003DMT400046864 Potato endoplasmic reticulum, golgi 34.49 38.09
KRH38551 Soybean endoplasmic reticulum, extracellular 38.15 38.08
HORVU3Hr1G011860.1 Barley peroxisome 37.76 38.06
AT2G30770.1 Thale cress endoplasmic reticulum 36.42 38.03
CDY05030 Canola plastid 28.32 37.98
CDX83029 Canola extracellular, golgi 35.45 37.94
KRH38544 Soybean extracellular, plasma membrane 38.15 37.86
Bra033509.1-P Field mustard plastid 36.61 37.77
HORVU5Hr1G081250.2 Barley plastid 38.92 37.76
KRH09093 Soybean extracellular, plasma membrane 37.57 37.72
CDX84818 Canola endoplasmic reticulum, golgi 36.03 37.63
CDX90699 Canola endoplasmic reticulum 31.21 37.59
HORVU1Hr1G076710.1 Barley endoplasmic reticulum 37.19 37.55
CDX68476 Canola extracellular, golgi 35.07 37.53
Bra036897.1-P Field mustard mitochondrion 34.87 37.47
AT5G24950.1 Thale cress endoplasmic reticulum 35.65 37.3
CDY21818 Canola endoplasmic reticulum, golgi, plasma membrane 36.22 37.15
Bra029893.1-P Field mustard endoplasmic reticulum, plastid 33.14 37.15
CDY69177 Canola cytosol 16.96 37.13
CDX83032 Canola endoplasmic reticulum, extracellular 33.33 37.12
Bra020467.1-P Field mustard endoplasmic reticulum 35.26 37.04
CDY05401 Canola endoplasmic reticulum 35.26 37.04
AT4G13310.1 Thale cress endoplasmic reticulum 35.45 37.02
CDX77898 Canola endoplasmic reticulum, golgi, plasma membrane 36.03 36.96
KRH09094 Soybean endoplasmic reticulum, golgi 36.8 36.94
HORVU5Hr1G088540.1 Barley endoplasmic reticulum, peroxisome 36.03 36.88
CDY69597 Canola cytosol 24.66 36.78
AT3G48290.2 Thale cress endoplasmic reticulum 36.42 36.77
CDY29767 Canola endoplasmic reticulum, plastid 35.26 36.67
HORVU2Hr1G003400.7 Barley endoplasmic reticulum 36.99 36.57
AT4G13290.1 Thale cress endoplasmic reticulum 34.49 36.53
AT1G11610.2 Thale cress endoplasmic reticulum 35.45 36.51
CDY05453 Canola endoplasmic reticulum 34.68 36.44
HORVU5Hr1G081210.1 Barley mitochondrion 37.96 36.15
HORVU1Hr1G001150.1 Barley endoplasmic reticulum, golgi 36.22 36.02
HORVU6Hr1G024850.2 Barley golgi 36.8 35.83
AT5G42590.1 Thale cress endoplasmic reticulum, golgi 34.3 35.81
CDX98656 Canola endoplasmic reticulum, plastid 34.49 35.73
Bra013449.1-P Field mustard endoplasmic reticulum 34.68 35.64
CDX78981 Canola endoplasmic reticulum 34.68 35.64
HORVU2Hr1G003450.4 Barley endoplasmic reticulum, extracellular 35.26 34.92
HORVU5Hr1G112130.1 Barley endoplasmic reticulum, plasma membrane 36.22 34.62
HORVU1Hr1G007790.1 Barley endoplasmic reticulum 34.3 34.43
HORVU2Hr1G025480.2 Barley endoplasmic reticulum 34.68 34.42
HORVU1Hr1G007840.2 Barley endoplasmic reticulum, extracellular 33.91 34.38
HORVU2Hr1G006850.2 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 35.07 34.08
HORVU2Hr1G006910.14 Barley endoplasmic reticulum, golgi 35.07 33.83
KRH50005 Soybean endoplasmic reticulum, golgi, plasma membrane 28.9 32.68
AT4G20240.1 Thale cress endoplasmic reticulum, extracellular 28.13 32.37
HORVU2Hr1G006830.7 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 22.16 31.68
HORVU2Hr1G002460.1 Barley endoplasmic reticulum, golgi 19.27 31.55
HORVU0Hr1G006170.5 Barley peroxisome 26.59 29.3
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287SW68ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:HORVU5Hr1G117710
EnsemblPlants:HORVU5Hr1G117710.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF134SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B473165SEG:seg
Description
No Description!
Coordinates
chrchr5H:+:651126556..651128352
Molecular Weight (calculated)
55664.5 Da
IEP (calculated)
8.262
GRAVY (calculated)
0.083
Length
519 amino acids
Sequence
(BLAST)
001: MVAAEMVVAP LDSPVLITVV LAFLLVVITL LVSFSTRRSS SNAPRLRLPP SPRGLPVVGH LHLLGSLPHR SLRSLAASHG PVMHLRLGRV STVVASSAAA
101: AEEAMKTRDV DFAGRPRLLM VDRFYYGNGG IGFAPYGEHW RQARRVCAVH MLSARRVASL GRVRAQEAAA LLDRVRRAGG VVNLSDSLVV YSNAVISRCT
201: LGGAGCGVEE GGGDGARLKK AFGEMEELLG TVPMGESVPW LGWVDTVTGL ERRAKRVFEE MDGLLERVIA DHRQRRRADS ATVHEEDFVD VMLDAGELGT
301: DSIKSIILDV LAAATASTSA LLERAMAELI NHPHEMRRLQ AEARAAVVPG AVVTEADLPR LPYLKAVVNE TLRLHPPAPL LLPRETVEDT RLQGHDVPAG
401: TRVLINAWAI GRDPATWGPR AEEFAPERFV GDELGGGAGR GFSFLPFGGG RRGCPGVEFA MLSNALALAS LVHGFDWEVP GHGGRRTPPV DMSELYGLSV
501: CLKAPLLLVA KTWPSVASS
Best Arabidopsis Sequence Match ( AT2G30770.1 )
(BLAST)
001: MEMILSISLC LTTLITLLLL RRFLKRTATK VNLPPSPWRL PVIGNLHQLS LHPHRSLRSL SLRYGPLMLL HFGRVPILVV SSGEAAQEVL KTHDHKFANR
101: PRSKAVHGLM NGGRDVVFAP YGEYWRQMKS VCILNLLTNK MVESFEKVRE DEVNAMIEKL EKASSSSSSE NLSELFITLP SDVTSRVALG RKHSEDETAR
201: DLKKRVRQIM ELLGEFPIGE YVPILAWIDG IRGFNNKIKE VSRGFSDLMD KVVQEHLEAS NDKADFVDIL LSIEKDKNSG FQVQRNDIKF MILDMFIGGT
301: STTSTLLEWT MTELIRSPKS MKKLQDEIRS TIRPHGSYIK EKEVENMKYL KAVIKEVLRL HPSLPMILPR LLSEDVKVKG YNIAAGTEVI INAWAIQRDT
401: AIWGPDAEEF KPERHLDSGL DYHGKNLNYI PFGSGRRICP GINLALGLAE VTVANLVGRF DWRVEAGPNG DQPDLTEAIG IDVCRKFPLI AFPSSVV
Arabidopsis Description
CYP71A13Indoleacetaldoxime dehydratase [Source:UniProtKB/Swiss-Prot;Acc:O49342]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.