Factsheet for PGSC0003DMT400039179

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
endoplasmic reticulum 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039176	Potato	cytosol	76.03	76.55
PGSC0003DMT400039354	Potato	cytosol	74.2	75.23
PGSC0003DMT400046711	Potato	endoplasmic reticulum	78.31	68.6
PGSC0003DMT400046722	Potato	endoplasmic reticulum, plasma membrane	76.26	67.47
PGSC0003DMT400046721	Potato	endoplasmic reticulum, golgi	76.26	66.67
PGSC0003DMT400039355	Potato	endoplasmic reticulum, plasma membrane	74.66	65.79
PGSC0003DMT400046718	Potato	extracellular, plasma membrane	72.6	63.35
PGSC0003DMT400046864	Potato	endoplasmic reticulum, golgi	66.21	61.7
PGSC0003DMT400046720	Potato	endoplasmic reticulum, golgi	64.38	61.3
PGSC0003DMT400046700	Potato	endoplasmic reticulum	55.48	56.12
PGSC0003DMT400046854	Potato	cytosol	47.26	56.1
CDY48166	Canola	cytosol	31.05	53.54
PGSC0003DMT400039185	Potato	cytosol	50.91	53.1
GSMUA_Achr1P21270_001	Banana	mitochondrion	36.99	47.51
Bra029898.1-P	Field mustard	mitochondrion	47.95	47.3
Bra029897.1-P	Field mustard	mitochondrion	47.72	47.07
TraesCSU01G247100.1	Wheat	cytosol	26.71	46.61
Bra019538.1-P	Field mustard	endoplasmic reticulum	50.68	45.87
AT3G48270.1	Thale cress	endoplasmic reticulum	50.0	44.79
TraesCS1B01G253600.1	Wheat	cytosol	29.68	44.37
AT3G48320.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	49.54	44.29
CDY21818	Canola	endoplasmic reticulum, golgi, plasma membrane	51.14	44.27
AT3G48300.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane	48.86	44.12
CDY05030	Canola	plastid	38.81	43.93
CDY69177	Canola	cytosol	23.74	43.88
TraesCS5B01G514200.1	Wheat	cytosol	29.68	43.62
CDX68474	Canola	endoplasmic reticulum, golgi	48.17	43.51
CDX68476	Canola	extracellular, golgi	48.17	43.51
AT3G48280.1	Thale cress	endoplasmic reticulum	48.63	43.47
CDX83028	Canola	endoplasmic reticulum, golgi	47.95	43.3
CDX77898	Canola	endoplasmic reticulum, golgi, plasma membrane	50.0	43.28
CDX83029	Canola	extracellular, golgi	47.72	43.09
AT3G48310.1	Thale cress	endoplasmic reticulum	47.95	42.86
Bra029893.1-P	Field mustard	endoplasmic reticulum, plastid	45.21	42.76
CDX90699	Canola	endoplasmic reticulum	42.01	42.69
AT3G48290.2	Thale cress	endoplasmic reticulum	49.77	42.41
AT4G13310.1	Thale cress	endoplasmic reticulum	47.72	42.05
Bra018069.1-P	Field mustard	extracellular, golgi	29.91	41.99
CDY69597	Canola	cytosol	33.33	41.95
TraesCS3B01G582700.1	Wheat	cytosol	31.51	41.95
CDX83032	Canola	endoplasmic reticulum, extracellular	44.52	41.85
Bra022813.1-P	Field mustard	mitochondrion, plastid	43.84	41.11
AT4G13290.1	Thale cress	endoplasmic reticulum	45.43	40.61
Bra036897.1-P	Field mustard	mitochondrion	44.29	40.17
CDY29767	Canola	endoplasmic reticulum, plastid	44.29	38.88
AT5G24960.1	Thale cress	endoplasmic reticulum	44.06	38.83
CDY23983	Canola	extracellular, golgi	44.06	38.83
Zm00001d008985_P001	Maize	endoplasmic reticulum	44.75	38.81
Bra033509.1-P	Field mustard	plastid	44.29	38.57
TraesCS3D01G160400.1	Wheat	endoplasmic reticulum	45.43	38.57
CDY05401	Canola	endoplasmic reticulum	43.38	38.46
HORVU3Hr1G031020.1	Barley	endoplasmic reticulum, golgi	45.21	38.37
CDX84818	Canola	endoplasmic reticulum, golgi	43.38	38.23
Bra013449.1-P	Field mustard	endoplasmic reticulum	44.06	38.22
CDX78981	Canola	endoplasmic reticulum	44.06	38.22
CDY05453	Canola	endoplasmic reticulum	42.92	38.06
AT2G30750.1	Thale cress	endoplasmic reticulum	43.15	38.03
Bra020467.1-P	Field mustard	endoplasmic reticulum	42.69	37.85
AT2G30770.1	Thale cress	endoplasmic reticulum	42.92	37.83
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	37.21	37.82
CDX98656	Canola	endoplasmic reticulum, plastid	43.15	37.72
AT5G24950.1	Thale cress	endoplasmic reticulum	42.69	37.7
TraesCS1A01G334800.1	Wheat	endoplasmic reticulum	44.06	37.7
TraesCS3A01G153000.1	Wheat	endoplasmic reticulum	44.29	37.67
EES02209	Sorghum	endoplasmic reticulum	44.29	37.52
AT1G11610.2	Thale cress	endoplasmic reticulum	43.15	37.5
Zm00001d039310_P001	Maize	endoplasmic reticulum	44.06	37.48
TraesCS1B01G205100.1	Wheat	endoplasmic reticulum	42.92	37.23
TraesCS1D01G166200.1	Wheat	endoplasmic reticulum	42.92	37.23
TraesCS1B01G347700.1	Wheat	endoplasmic reticulum, golgi	42.92	37.01
TraesCS1D01G337100.1	Wheat	plastid	42.69	36.88
TraesCS1D01G337300.1	Wheat	endoplasmic reticulum	43.38	36.82
TraesCS1A01G334700.1	Wheat	endoplasmic reticulum, golgi	42.69	36.81
HORVU3Hr1G030950.1	Barley	endoplasmic reticulum	44.29	36.74
HORVU3Hr1G031000.1	Barley	endoplasmic reticulum	44.29	36.67
TraesCS1A01G172900.1	Wheat	endoplasmic reticulum	43.38	36.61
TraesCS1D01G165800.1	Wheat	endoplasmic reticulum	43.38	36.61
TraesCS3B01G179500.1	Wheat	endoplasmic reticulum	44.06	36.48
TraesCS3D01G160200.1	Wheat	endoplasmic reticulum	44.06	36.48
Zm00001d008990_P001	Maize	endoplasmic reticulum	44.52	36.45
HORVU3Hr1G112810.2	Barley	endoplasmic reticulum, plastid	42.47	36.33
KXG31508	Sorghum	endoplasmic reticulum	44.98	36.28
HORVU1Hr1G045570.1	Barley	endoplasmic reticulum, golgi	43.84	36.23
AT5G42590.1	Thale cress	endoplasmic reticulum, golgi	41.1	36.22
EES02206	Sorghum	endoplasmic reticulum, mitochondrion	38.58	36.19
TraesCS1B01G191400.1	Wheat	plastid	42.92	36.15
Zm00001d008987_P001	Maize	endoplasmic reticulum	44.06	36.14
EES18503	Sorghum	endoplasmic reticulum	42.47	36.12
HORVU1Hr1G045500.1	Barley	endoplasmic reticulum	41.55	36.11
TraesCS3B01G179600.1	Wheat	endoplasmic reticulum	43.61	35.9
TraesCS3D01G160300.1	Wheat	endoplasmic reticulum	43.61	35.83
TraesCS3A01G152700.1	Wheat	unclear	43.38	35.71
TraesCS3D01G520900.1	Wheat	endoplasmic reticulum	41.78	35.67
TraesCS1D01G241900.1	Wheat	endoplasmic reticulum	41.1	35.64
HORVU1Hr1G076710.1	Barley	endoplasmic reticulum	41.55	35.41
Os01t0227800-01	Rice	plasma membrane	43.61	35.37
AT4G20240.1	Thale cress	endoplasmic reticulum, extracellular	36.3	35.26
TraesCS5D01G514700.1	Wheat	endoplasmic reticulum, plastid	40.87	35.1
Os01t0227700-01	Rice	endoplasmic reticulum, golgi	43.15	35.06
KXG31509	Sorghum	endoplasmic reticulum	41.78	35.06
EES02205	Sorghum	endoplasmic reticulum, extracellular	44.06	34.65
TraesCS4A01G358200.1	Wheat	endoplasmic reticulum	34.25	34.64
TraesCS3A01G152500.1	Wheat	endoplasmic reticulum	43.38	34.61
EES18502	Sorghum	endoplasmic reticulum, extracellular	40.87	34.36
HORVU5Hr1G117710.1	Barley	endoplasmic reticulum, golgi, plasma membrane	40.18	33.91
KXG31510	Sorghum	golgi, vacuole	42.47	33.7
Os05t0515200-01	Rice	plasma membrane	39.95	33.52
TraesCS3A01G514000.1	Wheat	endoplasmic reticulum, extracellular	32.19	33.49
Os01t0227500-01	Rice	endoplasmic reticulum	42.47	33.16
TraesCS1B01G347800.1	Wheat	extracellular, golgi, plasma membrane	30.37	32.2
Os05t0361000-00	Rice	endoplasmic reticulum	40.18	32.18
TraesCS1D01G337200.1	Wheat	endoplasmic reticulum, golgi	25.57	30.35
Os06t0267400-00	Rice	endoplasmic reticulum	28.77	30.0
TraesCS1A01G242000.1	Wheat	plastid	23.06	29.97

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:M1B7V9	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400015150	PGSC:PGSC0003DMG400015150
EnsemblPlants:PGSC0003DMT400039179	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF331
SUPFAM:SSF48264	UniParc:UPI000294CFA4	SEG:seg	:	:	:

Description

Cytochrome P450 71A4 [Source:PGSC_GENE;Acc:PGSC0003DMG400015150]

Coordinates

chr3:-:51533709..51535114

Molecular Weight (calculated)

49341.7 Da

IEP (calculated)

6.907

GRAVY (calculated)

-0.245

Length

438 amino acids

Sequence
(BLAST)

001: MLLHLGSKPV LVASSAEASR DIMKTHDLVC SSRPKSRMAD KLLYGSKDVA FSPYGEYWRQ IRSVTVLHLL SNKRVRSYSD IREEETSNMI EKIKQGCDSS
101: SSVIDLRDVF SCMTNNIISR VALGRKYDEV NKSGMNAKAI IEKLLSLLGT LNIGDYIPWL EWVNRITGLD TKVDKVAKEL DIFLESVFEE HIIRNTKGEY
201: HAGEAKDFVD VLLEIQNGKE TGFPLQRDSL KAVLVASIDS FAAGTDTTHT ALEWTMTELL RHPRAMETLQ NEVRRLVQGK AEIKEDDLGN MHYLKAAIKE
301: SLRLHPPIPL LIPRESIKDV KLLGYHIPAK TQVIINAWSI GRDPLLWENP EEFRPERFLN SDIDVKGQNF ELIPFGGGRR GCPGSTFAIM VNELALARIV
401: HKFNLALPKE EELDMTECTG ITIRRKSPLL AIATPCSD

Best Arabidopsis Sequence Match ( AT3G48270.1 )
(BLAST)

001: MMIMFFLLCS IIFVVTIIIF RKQKRGKKRN TLPSPPGLPL IGNLHQLGRH PHRSLCSLSH RYGPLMLLHF GRVPVLVVSS AELARDVLKT HDRVFASRPR
101: SKIFEKLLYD KHDVASAPYG EYWRQMKSVC VLHLFSNKMV RSFREVREEE ISLMMEKIRK SISLPVNLSK ILVSLTNDVI CKVALGRKYG GETDFKELME
201: RLNKLLGTFS VGSYVPWLAW IDWIRGLDCQ LEKTANDVDK FFERVVQDHV DGNRDMTDFV DVLLAIQRDK TVGFEINRVS IKAIVMNVFV GGTDTSSTLM
301: EWAMTELLRH PKCLKRLQEE VRTICKDKSS VSEEEIQNMS YLKAVIKEAL RLHPPLPLMV PHESTQDVRL GDHHIPAGTQ VLINAWAIGR EAATWGPDVE
401: EFRPERHLDS SVDYRGQAFE LIPFGSGRRI CPAISFAVVL NEVVLANLVH RFDWRLSVES TEDQTEVAES TGIAIHRMFP LYAIASNTT

Arabidopsis Description

CYP71A26Cytochrome P450 71A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.