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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019538.1-P Field mustard endoplasmic reticulum 75.1 79.75
AT3G48310.1 Thale cress endoplasmic reticulum 74.32 77.96
AT3G48270.1 Thale cress endoplasmic reticulum 73.15 76.89
CDX77898 Canola endoplasmic reticulum, golgi, plasma membrane 74.12 75.3
CDY21818 Canola endoplasmic reticulum, golgi, plasma membrane 74.12 75.3
AT3G48320.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 71.6 75.1
AT3G48280.1 Thale cress endoplasmic reticulum 69.46 72.86
AT3G48300.2 Thale cress endoplasmic reticulum, golgi, plasma membrane 66.93 70.93
VIT_17s0000g09510.t01 Wine grape endoplasmic reticulum, golgi 47.86 53.83
Solyc03g112010.2.1 Tomato endoplasmic reticulum 50.19 51.81
AT5G24960.1 Thale cress endoplasmic reticulum 49.61 51.31
PGSC0003DMT400039354 Potato cytosol 42.8 50.93
PGSC0003DMT400046721 Potato endoplasmic reticulum, golgi 49.42 50.7
PGSC0003DMT400039176 Potato cytosol 42.41 50.11
AT2G30750.1 Thale cress endoplasmic reticulum 48.44 50.1
AT4G13310.1 Thale cress endoplasmic reticulum 48.44 50.1
PGSC0003DMT400039179 Potato cytosol 42.41 49.77
AT2G30770.1 Thale cress endoplasmic reticulum 48.05 49.7
PGSC0003DMT400039355 Potato endoplasmic reticulum, plasma membrane 47.86 49.5
PGSC0003DMT400046711 Potato endoplasmic reticulum 47.86 49.2
AT5G24950.1 Thale cress endoplasmic reticulum 47.47 49.19
PGSC0003DMT400039185 Potato cytosol 40.08 49.05
KRH50004 Soybean golgi 47.86 49.0
Solyc03g111930.2.1 Tomato endoplasmic reticulum 47.08 48.79
VIT_17s0000g09570.t01 Wine grape endoplasmic reticulum 48.64 48.73
Solyc03g111920.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 46.69 48.68
Solyc03g111950.2.1 Tomato endoplasmic reticulum, golgi 47.08 48.59
Solyc03g111940.2.1 Tomato endoplasmic reticulum, plasma membrane 47.28 48.5
AT4G13290.1 Thale cress endoplasmic reticulum 46.11 48.37
AT1G11610.2 Thale cress endoplasmic reticulum 47.28 48.21
PGSC0003DMT400046722 Potato endoplasmic reticulum, plasma membrane 46.3 48.08
PGSC0003DMT400046864 Potato endoplasmic reticulum, golgi 43.58 47.66
PGSC0003DMT400046718 Potato extracellular, plasma membrane 46.5 47.61
AT5G42590.1 Thale cress endoplasmic reticulum, golgi 45.72 47.28
PGSC0003DMT400046720 Potato endoplasmic reticulum, golgi 42.22 47.17
Solyc03g111970.2.1 Tomato endoplasmic reticulum, golgi 46.3 47.04
KRH20487 Soybean endoplasmic reticulum, golgi 46.69 46.97
Solyc03g111880.2.1 Tomato endoplasmic reticulum, golgi 47.67 46.93
Solyc03g111990.2.1 Tomato endoplasmic reticulum, plasma membrane 46.11 46.93
Solyc03g112030.1.1 Tomato endoplasmic reticulum 45.14 46.4
PGSC0003DMT400046700 Potato endoplasmic reticulum 38.91 46.19
KRH38547 Soybean plastid 45.33 45.96
Solyc03g112040.1.1 Tomato endoplasmic reticulum 44.55 45.8
VIT_17s0000g09550.t01 Wine grape cytosol 25.88 45.7
KRH09094 Soybean endoplasmic reticulum, golgi 45.91 45.65
GSMUA_Achr1P21270_001 Banana mitochondrion 30.16 45.45
KRH38551 Soybean endoplasmic reticulum, extracellular 45.91 45.38
KRH38544 Soybean extracellular, plasma membrane 45.91 45.12
AT4G20240.1 Thale cress endoplasmic reticulum, extracellular 39.3 44.79
KRH40475 Soybean endoplasmic reticulum 44.55 44.04
PGSC0003DMT400046854 Potato cytosol 31.52 43.9
KRH09093 Soybean extracellular, plasma membrane 43.97 43.71
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 36.38 43.39
KRH38549 Soybean endoplasmic reticulum 39.3 42.44
TraesCS5B01G514200.1 Wheat cytosol 24.51 42.28
TraesCS1B01G253600.1 Wheat cytosol 23.93 41.98
TraesCSU01G247100.1 Wheat cytosol 20.43 41.83
Zm00001d039310_P001 Maize endoplasmic reticulum 41.44 41.36
TraesCS1D01G241900.1 Wheat endoplasmic reticulum 40.27 40.99
EES02209 Sorghum endoplasmic reticulum 41.05 40.81
TraesCS3D01G160400.1 Wheat endoplasmic reticulum 40.86 40.7
TraesCS1D01G337100.1 Wheat plastid 40.08 40.63
TraesCS1A01G334800.1 Wheat endoplasmic reticulum 40.47 40.62
TraesCS1B01G347700.1 Wheat endoplasmic reticulum, golgi 40.08 40.55
HORVU3Hr1G031020.1 Barley endoplasmic reticulum, golgi 40.66 40.5
TraesCS1A01G334700.1 Wheat endoplasmic reticulum, golgi 39.88 40.35
TraesCS1D01G337300.1 Wheat endoplasmic reticulum 40.47 40.31
KRH50005 Soybean endoplasmic reticulum, golgi, plasma membrane 35.99 40.3
TraesCS3D01G160200.1 Wheat endoplasmic reticulum 41.44 40.26
TraesCS3A01G153000.1 Wheat endoplasmic reticulum 40.27 40.19
HORVU3Hr1G031000.1 Barley endoplasmic reticulum 41.25 40.08
TraesCS3B01G179600.1 Wheat endoplasmic reticulum 41.44 40.04
HORVU3Hr1G030950.1 Barley endoplasmic reticulum 41.05 39.96
TraesCS3A01G152700.1 Wheat unclear 41.25 39.85
KXG31509 Sorghum endoplasmic reticulum 40.47 39.85
TraesCS3D01G160300.1 Wheat endoplasmic reticulum 41.25 39.77
TraesCS1A01G172900.1 Wheat endoplasmic reticulum 40.08 39.69
HORVU1Hr1G076710.1 Barley endoplasmic reticulum 39.69 39.69
TraesCS1B01G205100.1 Wheat endoplasmic reticulum 38.91 39.6
Os01t0227700-01 Rice endoplasmic reticulum, golgi 41.44 39.52
TraesCS1D01G165800.1 Wheat endoplasmic reticulum 39.88 39.5
TraesCS1D01G166200.1 Wheat endoplasmic reticulum 38.72 39.41
TraesCS3B01G179500.1 Wheat endoplasmic reticulum 40.47 39.32
TraesCS1B01G191400.1 Wheat plastid 39.69 39.23
Os01t0227800-01 Rice plasma membrane 41.05 39.07
HORVU1Hr1G045570.1 Barley endoplasmic reticulum, golgi 39.88 38.68
KXG31508 Sorghum endoplasmic reticulum 40.86 38.67
EES18503 Sorghum endoplasmic reticulum 38.72 38.64
TraesCS3B01G582700.1 Wheat cytosol 24.71 38.6
TraesCS1A01G242000.1 Wheat plastid 25.29 38.58
TraesCS1B01G347800.1 Wheat extracellular, golgi, plasma membrane 30.93 38.5
EES18502 Sorghum endoplasmic reticulum, extracellular 38.91 38.39
HORVU1Hr1G045500.1 Barley endoplasmic reticulum 37.55 38.29
TraesCS3A01G152500.1 Wheat endoplasmic reticulum 40.86 38.25
Zm00001d008987_P001 Maize endoplasmic reticulum 39.69 38.2
TraesCS3D01G520900.1 Wheat endoplasmic reticulum 37.94 38.01
Zm00001d008990_P001 Maize endoplasmic reticulum 39.49 37.94
KXG31510 Sorghum golgi, vacuole 40.66 37.86
TraesCS5D01G514700.1 Wheat endoplasmic reticulum, plastid 37.55 37.84
HORVU3Hr1G112810.2 Barley endoplasmic reticulum, plastid 37.55 37.7
EES02206 Sorghum endoplasmic reticulum, mitochondrion 34.24 37.69
Zm00001d008985_P001 Maize endoplasmic reticulum 36.97 37.62
Os01t0227500-01 Rice endoplasmic reticulum 41.05 37.61
TraesCS4A01G358200.1 Wheat endoplasmic reticulum 31.52 37.41
Os05t0515200-01 Rice plasma membrane 37.94 37.36
EES02205 Sorghum endoplasmic reticulum, extracellular 40.27 37.16
TraesCS3A01G514000.1 Wheat endoplasmic reticulum, extracellular 30.16 36.82
Os06t0267400-00 Rice endoplasmic reticulum 29.77 36.43
HORVU5Hr1G117710.1 Barley endoplasmic reticulum, golgi, plasma membrane 36.77 36.42
TraesCS1D01G337200.1 Wheat endoplasmic reticulum, golgi 26.07 36.31
Os05t0361000-00 Rice endoplasmic reticulum 37.55 35.28
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:823987ProteinID:AEE78396.2ArrayExpress:AT3G48290EnsemblPlantsGene:AT3G48290
RefSeq:AT3G48290TAIR:AT3G48290RefSeq:AT3G48290-TAIR-GEnsemblPlants:AT3G48290.2TAIR:AT3G48290.2Symbol:CYP71A24
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfUniProt:F4JDX0GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396
RefSeq:NP_001190031.2PFAM:PF00067PO:PO:0000293PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF331SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0003C6939DSEG:seg
Description
CYP71A24Cytochrome P450, family 71, subfamily A, polypeptide 24 [Source:UniProtKB/TrEMBL;Acc:F4JDX0]
Coordinates
chr3:+:17882465..17884515
Molecular Weight (calculated)
59136.0 Da
IEP (calculated)
7.483
GRAVY (calculated)
-0.133
Length
514 amino acids
Sequence
(BLAST)
001: MKMMMMIILL LCSIILITIL FFKKQSRGKK SNAPPSPPRL PLIRNLHQLG RHPHRSLCSL SHRYGPLMLL HFGSVPVLVV SSADAAKDVL KTHDRVFASR
101: PRSKIFDKIF YNGRDVALAP YGEYWRQMKS VCVLHLFSNK MVRSFRDVRQ EEISLMIEKI RISSSLRINL SEILVNLTNN VICRVALGRK YGGKTDFKDL
201: MKRLTRLLGE FSVGSYVSWL AWIDWIRGLD GQLIKISNDL DEFLERVVQD HVDGDGHKND FVDFLLTIER EKSVGFEIDR LSIKAIILVK GRYENKFKFT
301: DELVYNHSSC FGFQDVFVGD MDTTYTLLEW AMTELLCHHE CLDRLQEEVR MVCKDKSGVS EDDLQDMKYL KAVIKETLRL HPPLPLMVPH ESTHDVKLRD
401: YHIPAGTHVM INAWAIGREA ATWGPDAEEF RPERHLNSYV DYRGQDTELV PFGAGRRICP AISFAVVLDE VVLANLVHQF DWTLPEESTE YQTDVAESTG
501: MAVHRMFPLF AMTT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.