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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • endoplasmic reticulum 6
  • golgi 4
  • extracellular 4
  • vacuole 3
  • plasma membrane 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G30750.1 Thale cress endoplasmic reticulum 83.53 84.71
AT2G30770.1 Thale cress endoplasmic reticulum 81.15 82.29
CDY23983 Canola extracellular, golgi 75.0 76.06
Bra022813.1-P Field mustard mitochondrion, plastid 70.24 75.8
CDX84818 Canola endoplasmic reticulum, golgi 74.01 75.05
AT5G24960.1 Thale cress endoplasmic reticulum 63.69 64.59
AT5G24950.1 Thale cress endoplasmic reticulum 61.51 62.5
AT4G13310.1 Thale cress endoplasmic reticulum 57.14 57.95
AT4G13290.1 Thale cress endoplasmic reticulum 55.36 56.94
AT5G42590.1 Thale cress endoplasmic reticulum, golgi 55.75 56.54
AT4G20240.1 Thale cress endoplasmic reticulum, extracellular 48.21 53.88
AT3G48270.1 Thale cress endoplasmic reticulum 47.82 49.28
AT3G48310.1 Thale cress endoplasmic reticulum 47.02 48.37
AT3G48280.1 Thale cress endoplasmic reticulum 46.43 47.76
AT3G48320.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 46.23 47.55
VIT_17s0000g09510.t01 Wine grape endoplasmic reticulum, golgi 43.06 47.48
AT3G48290.2 Thale cress endoplasmic reticulum 48.21 47.28
AT3G48300.2 Thale cress endoplasmic reticulum, golgi, plasma membrane 45.24 47.01
PGSC0003DMT400046700 Potato endoplasmic reticulum 39.68 46.19
Solyc03g112030.1.1 Tomato endoplasmic reticulum 45.44 45.8
PGSC0003DMT400046854 Potato cytosol 33.13 45.26
Solyc03g112040.1.1 Tomato endoplasmic reticulum 44.84 45.2
Solyc03g111880.2.1 Tomato endoplasmic reticulum, golgi 46.43 44.83
KRH50004 Soybean golgi 44.44 44.62
PGSC0003DMT400039185 Potato cytosol 37.1 44.52
Solyc03g112010.2.1 Tomato endoplasmic reticulum 43.65 44.18
VIT_17s0000g09570.t01 Wine grape endoplasmic reticulum 44.64 43.86
KRH09094 Soybean endoplasmic reticulum, golgi 44.64 43.52
KRH20487 Soybean endoplasmic reticulum, golgi 44.05 43.44
KRH38547 Soybean plastid 43.65 43.39
KRH38544 Soybean extracellular, plasma membrane 44.84 43.21
Solyc03g111990.2.1 Tomato endoplasmic reticulum, plasma membrane 43.25 43.17
PGSC0003DMT400039179 Potato cytosol 37.5 43.15
PGSC0003DMT400046864 Potato endoplasmic reticulum, golgi 39.88 42.77
KRH38551 Soybean endoplasmic reticulum, extracellular 43.85 42.5
KRH40475 Soybean endoplasmic reticulum 43.85 42.5
PGSC0003DMT400046711 Potato endoplasmic reticulum 42.06 42.4
PGSC0003DMT400039355 Potato endoplasmic reticulum, plasma membrane 41.67 42.25
PGSC0003DMT400046718 Potato extracellular, plasma membrane 42.06 42.23
KRH38549 Soybean endoplasmic reticulum 39.88 42.23
Solyc03g111970.2.1 Tomato endoplasmic reticulum, golgi 42.26 42.09
PGSC0003DMT400039354 Potato cytosol 35.91 41.9
Solyc03g111930.2.1 Tomato endoplasmic reticulum 41.07 41.73
VIT_17s0000g09550.t01 Wine grape cytosol 24.01 41.58
PGSC0003DMT400046721 Potato endoplasmic reticulum, golgi 41.27 41.52
Solyc03g111940.2.1 Tomato endoplasmic reticulum, plasma membrane 41.27 41.52
PGSC0003DMT400046722 Potato endoplasmic reticulum, plasma membrane 40.48 41.21
KRH09093 Soybean extracellular, plasma membrane 42.26 41.2
Solyc03g111950.2.1 Tomato endoplasmic reticulum, golgi 40.67 41.16
TraesCSU01G247100.1 Wheat cytosol 20.44 41.04
PGSC0003DMT400046720 Potato endoplasmic reticulum, golgi 37.3 40.87
GSMUA_Achr1P21270_001 Banana mitochondrion 27.58 40.76
PGSC0003DMT400039176 Potato cytosol 35.12 40.69
Solyc03g111920.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 39.68 40.57
TraesCS3D01G160400.1 Wheat endoplasmic reticulum 39.68 38.76
TraesCS3A01G153000.1 Wheat endoplasmic reticulum 39.29 38.45
TraesCS1B01G205100.1 Wheat endoplasmic reticulum 38.49 38.42
TraesCS1D01G166200.1 Wheat endoplasmic reticulum 38.49 38.42
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 32.74 38.28
TraesCS1B01G253600.1 Wheat cytosol 22.22 38.23
HORVU1Hr1G045500.1 Barley endoplasmic reticulum 37.5 37.5
TraesCS4A01G358200.1 Wheat endoplasmic reticulum 32.14 37.41
HORVU3Hr1G031020.1 Barley endoplasmic reticulum, golgi 38.29 37.4
TraesCS1A01G172900.1 Wheat endoplasmic reticulum 38.49 37.38
TraesCS1D01G165800.1 Wheat endoplasmic reticulum 38.49 37.38
KRH50005 Soybean endoplasmic reticulum, golgi, plasma membrane 33.93 37.25
HORVU3Hr1G112810.2 Barley endoplasmic reticulum, plastid 37.7 37.11
TraesCS3A01G514000.1 Wheat endoplasmic reticulum, extracellular 30.95 37.05
TraesCS3D01G520900.1 Wheat endoplasmic reticulum 37.7 37.04
EES02209 Sorghum endoplasmic reticulum 37.9 36.94
HORVU3Hr1G030950.1 Barley endoplasmic reticulum 38.69 36.93
TraesCS1B01G191400.1 Wheat plastid 38.1 36.92
TraesCS5B01G514200.1 Wheat cytosol 21.83 36.91
Zm00001d039310_P001 Maize endoplasmic reticulum 37.7 36.89
TraesCS1B01G347700.1 Wheat endoplasmic reticulum, golgi 37.1 36.81
TraesCS3B01G582700.1 Wheat cytosol 24.01 36.78
HORVU1Hr1G045570.1 Barley endoplasmic reticulum, golgi 38.49 36.6
TraesCS3D01G160300.1 Wheat endoplasmic reticulum 38.69 36.59
TraesCS1D01G337100.1 Wheat plastid 36.71 36.49
TraesCS3B01G179500.1 Wheat endoplasmic reticulum 38.29 36.48
TraesCS3D01G160200.1 Wheat endoplasmic reticulum 38.29 36.48
TraesCS5D01G514700.1 Wheat endoplasmic reticulum, plastid 36.9 36.47
TraesCS1A01G334700.1 Wheat endoplasmic reticulum, golgi 36.71 36.42
Os01t0227700-01 Rice endoplasmic reticulum, golgi 38.89 36.36
HORVU3Hr1G031000.1 Barley endoplasmic reticulum 38.1 36.29
TraesCS3A01G152700.1 Wheat unclear 38.29 36.28
TraesCS3B01G179600.1 Wheat endoplasmic reticulum 38.29 36.28
TraesCS1D01G241900.1 Wheat endoplasmic reticulum 36.31 36.24
EES02206 Sorghum endoplasmic reticulum, mitochondrion 33.33 35.97
Zm00001d008987_P001 Maize endoplasmic reticulum 37.9 35.77
TraesCS1A01G334800.1 Wheat endoplasmic reticulum 36.31 35.74
KXG31508 Sorghum endoplasmic reticulum 38.49 35.73
HORVU1Hr1G076710.1 Barley endoplasmic reticulum 36.31 35.6
Zm00001d008990_P001 Maize endoplasmic reticulum 37.7 35.51
TraesCS1D01G337300.1 Wheat endoplasmic reticulum 36.31 35.47
HORVU5Hr1G117710.1 Barley endoplasmic reticulum, golgi, plasma membrane 36.51 35.45
EES02205 Sorghum endoplasmic reticulum, extracellular 39.09 35.37
TraesCS3A01G152500.1 Wheat endoplasmic reticulum 38.49 35.34
KXG31509 Sorghum endoplasmic reticulum 36.51 35.25
Os01t0227800-01 Rice plasma membrane 37.7 35.19
Os01t0227500-01 Rice endoplasmic reticulum 39.09 35.12
Zm00001d008985_P001 Maize endoplasmic reticulum 35.12 35.05
EES18503 Sorghum endoplasmic reticulum 35.71 34.95
EES18502 Sorghum endoplasmic reticulum, extracellular 35.32 34.17
Os05t0515200-01 Rice plasma membrane 35.12 33.91
TraesCS1D01G337200.1 Wheat endoplasmic reticulum, golgi 24.8 33.88
TraesCS1B01G347800.1 Wheat extracellular, golgi, plasma membrane 27.58 33.66
Os05t0361000-00 Rice endoplasmic reticulum 36.51 33.64
TraesCS1A01G242000.1 Wheat plastid 22.42 33.53
KXG31510 Sorghum golgi, vacuole 36.71 33.51
Os06t0267400-00 Rice endoplasmic reticulum 26.79 32.14
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:837705ProteinID:AEE28761.1ArrayExpress:AT1G11610EnsemblPlantsGene:AT1G11610
RefSeq:AT1G11610TAIR:AT1G11610RefSeq:AT1G11610-TAIR-GEnsemblPlants:AT1G11610.2TAIR:AT1G11610.2Unigene:At.51574
Symbol:CYP71A18InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfUniProt:F4I8Y7
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
InterPro:IPR036396RefSeq:NP_001184964.1PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF331SUPFAM:SSF48264SignalP:SignalP-noTMUniParc:UPI0001E92B69SEG:seg
Description
CYP71A18Cytochrome P450, family 71, subfamily A, polypeptide 18 [Source:UniProtKB/TrEMBL;Acc:F4I8Y7]
Coordinates
chr1:-:3906862..3909338
Molecular Weight (calculated)
57382.3 Da
IEP (calculated)
8.545
GRAVY (calculated)
-0.161
Length
504 amino acids
Sequence
(BLAST)
001: MEMTLMVSLC LTTLLTLLLL KKFLKRTAKK VNLPPSPWRI PVIGNLHQLS LHPHRSLHSL SLRYGPLMLL HFGRVPILVV SSSEAAHEIL KTHDLKFANR
101: PKSKAVHGLM NGGRDVVFGP YGEYWRQMKS VCILNLLTNK MVASFEKVRE EEVNAMMEKL EKASCSSSAE NLSELFVTLT SDVTSRVSLG KKYWEDETAG
201: GLKKRVRQIM ELLREFPIGD YVPALAWIDR INGFNSKIVE VSRAYSDLME KVVQEHLEAG EHKADFVNIL LSIEKEKNNG FKVQRNDIKF MILDMFIGGI
301: STSSTLLEWI MTELIRNPEC MKKLQNEIRS TIRPHGSYIK EKEVENMRYL KAVIKEVFRV HPPLPLILPR LLTEDVKVKG YDIAAGTEVL INAWSIHRDP
401: AIWGPDAEEF KPERHLDSTL DYHGQDLKYI PFGSGRRICP GINLAMGLVE VTLANLVGRF DWSVDPGPNG DQPDLAEDFG LDIPKKVFIN NLPRIRFECI
501: DFKI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.