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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • endoplasmic reticulum 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:endoplasmic reticulum
MultiLoc:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G275300.1 Wheat endoplasmic reticulum 86.79 90.96
TraesCS1D01G264800.1 Wheat endoplasmic reticulum 84.22 90.18
TraesCS1A01G264600.1 Wheat extracellular, plasma membrane 86.24 89.87
EES19549 Sorghum endoplasmic reticulum 69.54 71.11
Os05t0424300-01 Rice endoplasmic reticulum 66.61 69.94
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 37.98 50.74
OQU87061 Sorghum endoplasmic reticulum, extracellular 47.16 48.13
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 30.64 45.88
HORVU3Hr1G031020.1 Barley endoplasmic reticulum, golgi 41.83 44.19
HORVU6Hr1G024850.2 Barley golgi 42.94 43.9
HORVU3Hr1G112810.2 Barley endoplasmic reticulum, plastid 40.73 43.36
HORVU7Hr1G107280.1 Barley golgi 40.55 42.83
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 36.33 42.67
HORVU5Hr1G112130.1 Barley endoplasmic reticulum, plasma membrane 42.39 42.54
HORVU1Hr1G045570.1 Barley endoplasmic reticulum, golgi 41.28 42.45
HORVU3Hr1G011850.4 Barley golgi, mitochondrion, peroxisome 40.37 42.06
HORVU3Hr1G011820.3 Barley golgi 39.45 41.99
HORVU2Hr1G103760.6 Barley endoplasmic reticulum, golgi 35.23 41.92
HORVU2Hr1G025480.2 Barley endoplasmic reticulum 40.18 41.87
HORVU3Hr1G031000.1 Barley endoplasmic reticulum 40.37 41.59
HORVU3Hr1G011870.4 Barley golgi 39.08 41.44
HORVU5Hr1G081270.1 Barley endoplasmic reticulum, vacuole 38.17 41.35
HORVU1Hr1G045500.1 Barley endoplasmic reticulum 38.17 41.27
HORVU3Hr1G011860.1 Barley peroxisome 38.9 41.16
HORVU3Hr1G030950.1 Barley endoplasmic reticulum 39.82 41.1
HORVU2Hr1G003450.4 Barley endoplasmic reticulum, extracellular 39.08 40.65
HORVU5Hr1G117710.1 Barley endoplasmic reticulum, golgi, plasma membrane 38.53 40.46
HORVU5Hr1G081260.1 Barley plastid 38.17 40.31
HORVU1Hr1G007840.2 Barley endoplasmic reticulum, extracellular 37.8 40.23
HORVU5Hr1G088540.1 Barley endoplasmic reticulum, peroxisome 37.25 40.04
HORVU2Hr1G003400.7 Barley endoplasmic reticulum 38.35 39.81
HORVU2Hr1G006910.14 Barley endoplasmic reticulum, golgi 39.27 39.78
HORVU2Hr1G006850.2 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 38.9 39.7
HORVU2Hr1G006830.7 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 26.42 39.67
GSMUA_Achr11P... Banana mitochondrion 37.43 39.46
HORVU1Hr1G001150.1 Barley endoplasmic reticulum, golgi 37.61 39.27
HORVU1Hr1G007790.1 Barley endoplasmic reticulum 37.25 39.27
HORVU5Hr1G081250.2 Barley plastid 38.17 38.88
HORVU1Hr1G076710.1 Barley endoplasmic reticulum 36.51 38.72
HORVU5Hr1G081210.1 Barley mitochondrion 37.25 37.25
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 27.16 36.72
HORVU0Hr1G006170.5 Barley peroxisome 30.28 35.03
HORVU2Hr1G002460.1 Barley endoplasmic reticulum, golgi 20.0 34.38
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287FZL8ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488
GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:HORVU1Hr1G064990EnsemblPlants:HORVU1Hr1G064990.5InterPro:IPR036396PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF128SUPFAM:SSF48264
UniParc:UPI000B4713C9SEG:seg::::
Description
No Description!
Coordinates
chrchr1H:+:465215401..465217296
Molecular Weight (calculated)
59602.6 Da
IEP (calculated)
7.026
GRAVY (calculated)
-0.083
Length
545 amino acids
Sequence
(BLAST)
001: VDCRRLPPPA TLSFESSSTG STPSMELAAL LLLVPFLVAG LLYLGKKDGG VDARRLPPAP RGLPVIGNLH QVGALPHRAL RALAAANGAP HLLRLRLGQV
101: PALVASSPAA AAELMRAQDH AFATRPYFRT AEILTYGFRD LVFAPHGEHW RHVRRLCSEH VLSAARSQRH NAMREREVTA LVQAVADHAY SPAAAVVDVS
201: GALYRFSNDV VSRVVSGTRL SREEGGRSEL FRELIEENTA LLGGFFVGDY FPALAWADAL LSGGGARAWR NFRRWDELLE KVVVEHEDER SRRGGGGDAG
301: MEEEDFVDVL LALREHGQDG FELSRDIIKS LLADMFAAGT ETTYIALEWA MSELMRNPAA MRKLEHEVRR AAAAPAGGIA KADALGAATP YLRAVVKETL
401: RLHPPVPLLL PRECMQDATV MGYHVAKGTR VFVNAWVINR DPGSWHAPEE FLPERCEDDN LAHSVDFRGG HFAFIPFGAG RRICPGMQFG LATVELALAN
501: LVRLFDWELP DGMAPEDLDM SDAPGLTTRR RVGLRLVARP VRVGS
Best Arabidopsis Sequence Match ( AT3G26160.1 )
(BLAST)
001: MAISLLCLFL ITFVSLTIVG CKIKRSIWNL PPSPPKLPVI GNLHQVGELP HRSFRRLAER TGHVMLLHLG FVPVTVISSR EAAEEVLRTH DLDCCSRPNL
101: VGSRLISRGF KDLNFTPYGE EWKERRRFLV GELFCSKKLQ SFIYIKEVEC NFLVKKLSES AVDQSPVDLS KTLFWLAASI LFRVAFGQSF HESEFTDTDK
201: IDELVFETET AQGSFTCSDF FPIAGLGWLV DWISGQHKRL NDVFLKLDAL LQHVIDDHSN PGRSKDHKDI VDVMLDVMHK QGKDDSLRLT IDHIKGLLTN
301: IIIAGIDTGA LTMIWTMTEL ARNPEIMKKV QGEIRDRLGN NRERITKEDL DKVPFLNLVI KETFRLHPVA PLLLPRETMA HVKVQGYDIP PKRRILVNAW
401: AIGRDPKLWT DPEEFKPERF IDSPVDYRGQ HFELLPFGSG RRICPGMAMG MATLELGLLN LLYFFDWKLP DGMSHKDIDT EEAGTLTVVK KVHLKLVPVR
501: VP
Arabidopsis Description
CYP71B17Cytochrome P450 71B17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTM6]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.