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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES19549 Sorghum endoplasmic reticulum 62.73 62.85
TraesCS1D01G264800.1 Wheat endoplasmic reticulum 48.88 51.28
TraesCS1B01G275300.1 Wheat endoplasmic reticulum 49.81 51.15
TraesCS1A01G264600.1 Wheat extracellular, plasma membrane 49.25 50.29
Os05t0424300-01 Rice endoplasmic reticulum 46.63 47.98
HORVU1Hr1G064990.5 Barley endoplasmic reticulum 48.13 47.16
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 25.09 33.25
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 25.28 33.09
EES02205 Sorghum endoplasmic reticulum, extracellular 30.52 29.26
OQU80202 Sorghum mitochondrion 24.16 29.05
EES02209 Sorghum endoplasmic reticulum 27.9 28.82
KXG31508 Sorghum endoplasmic reticulum 28.84 28.36
OQU80201 Sorghum endoplasmic reticulum, golgi 27.15 28.27
EES13189 Sorghum endoplasmic reticulum, golgi 29.4 28.14
EER94752 Sorghum extracellular, golgi 27.9 27.9
EES10457 Sorghum endoplasmic reticulum, golgi 27.53 27.79
EES13188 Sorghum endoplasmic reticulum, golgi 28.65 27.72
KXG31510 Sorghum golgi, vacuole 28.65 27.72
EES13191 Sorghum endoplasmic reticulum, plastid, vacuole 27.72 27.61
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 23.97 27.59
KXG31509 Sorghum endoplasmic reticulum 26.78 27.39
EES02571 Sorghum peroxisome, plasma membrane, plastid 27.72 27.26
EES13194 Sorghum plastid 27.15 26.95
OQU83504 Sorghum plastid 27.34 26.94
EES14519 Sorghum endoplasmic reticulum, golgi, plastid 27.72 26.91
EER97084 Sorghum endoplasmic reticulum, plastid 25.47 26.88
KXG24681 Sorghum endoplasmic reticulum 27.72 26.86
EER96688 Sorghum endoplasmic reticulum, plastid 25.47 26.77
EES11970 Sorghum endoplasmic reticulum, plasma membrane, plastid 26.4 26.76
EER97083 Sorghum endoplasmic reticulum 25.28 26.73
EES13192 Sorghum plastid 26.22 26.52
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 17.98 26.37
EER97082 Sorghum endoplasmic reticulum 24.91 26.28
EES11971 Sorghum plastid 26.4 26.16
EES08928 Sorghum extracellular, golgi 26.59 26.15
GSMUA_Achr11P... Banana mitochondrion 25.28 26.11
EES06580 Sorghum endoplasmic reticulum, plasma membrane, plastid 26.4 26.11
EES02206 Sorghum endoplasmic reticulum, mitochondrion 22.66 25.91
EER96611 Sorghum plasma membrane, plastid 25.09 25.82
EER90226 Sorghum endoplasmic reticulum, plasma membrane, plastid 26.22 25.64
EES11071 Sorghum extracellular, golgi, mitochondrion 26.22 25.23
OQU92584 Sorghum cytosol 24.53 24.67
EES18503 Sorghum endoplasmic reticulum 23.78 24.66
EES18502 Sorghum endoplasmic reticulum, extracellular 22.47 23.03
OQU80485 Sorghum plastid 13.48 18.9
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1W0VY70InterPro:Cyt_P450InterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705
GO:GO:0020037GO:GO:0055114InterPro:IPR036396EnsemblPlants:OQU87061ProteinID:OQU87061ProteinID:OQU87061.1
PFAM:PF00067PANTHER:PTHR24298PANTHER:PTHR24298:SF128EnsemblPlantsGene:SORBI_3003G199101SUPFAM:SSF48264UniParc:UPI0009DC8956
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:-:52574271..52595240
Molecular Weight (calculated)
58860.4 Da
IEP (calculated)
9.560
GRAVY (calculated)
-0.347
Length
534 amino acids
Sequence
(BLAST)
001: MTNQRGHLEL VLPPNGWILL RVLPPKGDHW RWLLLVLPCT QDPPTSWLSI YADFTKVWAT GRNARRLPPG PRGLPLIGNL HQVGALPHRA LCSLAATHGA
101: PDLMQLRLGH VLALVASSPA AAAALMREHD GAFGTRPYFR TAEILTYGFQ DLVFAPHSEH WRHVRRLCSA HVLSAVRSHS FDGMREREVA ALVRTMRERA
201: GGVVDMSKAL YGFANGVICR AVSGTGRGLS REEEEEEEEE EGRRSELFRA LIEVNTALLG GFCVGDYFPS LAWMDDALSG AGARAWRNLK RWDDLLEKVV
301: QEHEARRRRR GDGDVEVEEE DFVDVLLAVV LQAEEKQDHD GGFELTSDAI KSLLADMFAA GTERRPSSCW SGPCRSRSGT PRPWSDSRVN SVQRRPAAPP
401: WLDAATRLAR RRRPTCGPWR PSVSTRRCRC SCPASACATR RCWGSHVARG TRCACSTGRC RAARRRGPRH VGRARACHAQ AGAPPASSRI GETDDVAFVC
501: PVQRRTSGAA GVLGVSQAKA QLILLSRRGE CALL
Best Arabidopsis Sequence Match ( AT3G48270.1 )
(BLAST)
001: MMIMFFLLCS IIFVVTIIIF RKQKRGKKRN TLPSPPGLPL IGNLHQLGRH PHRSLCSLSH RYGPLMLLHF GRVPVLVVSS AELARDVLKT HDRVFASRPR
101: SKIFEKLLYD KHDVASAPYG EYWRQMKSVC VLHLFSNKMV RSFREVREEE ISLMMEKIRK SISLPVNLSK ILVSLTNDVI CKVALGRKYG GETDFKELME
201: RLNKLLGTFS VGSYVPWLAW IDWIRGLDCQ LEKTANDVDK FFERVVQDHV DGNRDMTDFV DVLLAIQRDK TVGFEINRVS IKAIVMNVFV GGTDTSSTLM
301: EWAMTELLRH PKCLKRLQEE VRTICKDKSS VSEEEIQNMS YLKAVIKEAL RLHPPLPLMV PHESTQDVRL GDHHIPAGTQ VLINAWAIGR EAATWGPDVE
401: EFRPERHLDS SVDYRGQAFE LIPFGSGRRI CPAISFAVVL NEVVLANLVH RFDWRLSVES TEDQTEVAES TGIAIHRMFP LYAIASNTT
Arabidopsis Description
CYP71A26Cytochrome P450 71A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.