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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • nucleus 1
  • plastid 3
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES13188 Sorghum endoplasmic reticulum, golgi 81.54 82.43
Zm00001d035178_P001 Maize endoplasmic reticulum 76.34 77.88
EES14519 Sorghum endoplasmic reticulum, golgi, plastid 76.7 77.82
Zm00001d034986_P001 Maize endoplasmic reticulum 74.55 73.37
OQU80202 Sorghum mitochondrion 56.27 70.72
OQU80201 Sorghum endoplasmic reticulum, golgi 63.26 68.81
TraesCS1A01G092100.1 Wheat cytosol 37.81 67.63
OQU83504 Sorghum plastid 63.26 65.13
TraesCS1D01G100700.1 Wheat endoplasmic reticulum, golgi 61.11 64.46
TraesCS1B01G119900.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid 61.29 64.17
EES08928 Sorghum extracellular, golgi 62.37 64.09
TraesCS2D01G148100.1 Wheat mitochondrion 48.92 61.07
HORVU2Hr1G025480.2 Barley endoplasmic reticulum 56.99 60.8
TraesCS2B01G169000.1 Wheat endoplasmic reticulum, golgi, plastid 57.35 60.61
TraesCS2B01G169100.1 Wheat endoplasmic reticulum 57.17 60.42
EES13191 Sorghum endoplasmic reticulum, plastid, vacuole 55.91 58.21
EES13192 Sorghum plastid 53.41 56.44
EES02571 Sorghum peroxisome, plasma membrane, plastid 53.23 54.7
EES13194 Sorghum plastid 52.51 54.46
EER94752 Sorghum extracellular, golgi 50.18 52.43
EES11970 Sorghum endoplasmic reticulum, plasma membrane, plastid 49.46 52.37
EES10457 Sorghum endoplasmic reticulum, golgi 49.28 51.98
EES11971 Sorghum plastid 49.82 51.58
EER90226 Sorghum endoplasmic reticulum, plasma membrane, plastid 48.92 50.0
EES11071 Sorghum extracellular, golgi, mitochondrion 49.64 49.91
EES06580 Sorghum endoplasmic reticulum, plasma membrane, plastid 48.21 49.81
OQU92584 Sorghum cytosol 44.44 46.7
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 32.97 45.1
EES19549 Sorghum endoplasmic reticulum 42.65 44.65
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 28.67 43.96
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 36.38 43.75
KXG31508 Sorghum endoplasmic reticulum 40.32 41.44
EES02209 Sorghum endoplasmic reticulum 37.1 40.04
GSMUA_Achr11P... Banana mitochondrion 36.74 39.65
KXG24681 Sorghum endoplasmic reticulum 38.53 39.02
EES18503 Sorghum endoplasmic reticulum 35.48 38.45
EER97083 Sorghum endoplasmic reticulum 34.77 38.42
EER97084 Sorghum endoplasmic reticulum, plastid 34.77 38.34
EES02206 Sorghum endoplasmic reticulum, mitochondrion 32.08 38.33
EES02205 Sorghum endoplasmic reticulum, extracellular 38.17 38.24
EER97082 Sorghum endoplasmic reticulum 34.59 38.14
KXG31509 Sorghum endoplasmic reticulum 35.66 38.12
EES18502 Sorghum endoplasmic reticulum, extracellular 35.3 37.81
EER96611 Sorghum plasma membrane, plastid 34.95 37.57
EER96688 Sorghum endoplasmic reticulum, plastid 34.05 37.4
KXG31510 Sorghum golgi, vacuole 36.38 36.78
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 26.52 36.72
OQU80485 Sorghum plastid 24.37 35.7
OQU87061 Sorghum endoplasmic reticulum, extracellular 28.14 29.4
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8064325UniProt:C5YLF1InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES13189ProteinID:EES13189ProteinID:EES13189.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF163EnsemblPlantsGene:SORBI_3007G003500SUPFAM:SSF48264unigene:Sbi.18409TMHMM:TMhelixUniParc:UPI0001A876BA
RefSeq:XP_002443694.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr7:+:320663..323443
Molecular Weight (calculated)
62226.4 Da
IEP (calculated)
7.267
GRAVY (calculated)
-0.135
Length
558 amino acids
Sequence
(BLAST)
001: MCHLLDLAHQ LSHPTSSSPL VVVLAKWLLL LVVPLLLLLH YYTSRRSSRR HGSDDDKQLL PPSPPGLPII GHLHLVGELP HVSLRDLATK HAGGGLMLLR
101: LGSVPTLVVT SPPAAEAIMR THDHVFASRP TSTVSDDLLY GSSDIAFSPY GEHWRQARKL VTTHLLTVKK VNSYCRSRKE EVSLVMDKIR EAATAGTAVD
201: MSTMMNTFAN DIVSRAVSGK FFRAEGRNKL FRELVEANTS LFGGFNLEDY FPVLARSLGF LSRRFLLNRA QETHKRWDEL LETILSDHER RNSSLRRHDG
301: GDFTDLLLSV QKEYGMTRNH VKAILMDMFA AGTDTSSLVL EFAMAELMRN PQQMAKLQGE VRKHTPEGQK MVEEEDLASM PYLRAVVKET LRLRAPVPLL
401: VPHLSMADCI VNGYHVPSGT RVIVNAWALG RDPESWEKPE EFMPERFVDG GSAAAGVDFK GNHFQFLPFG AGRRICPGLN FGIATVEIML ANLMYCFDWQ
501: LPMGMEEKDV DMTEVFGITV HLKERLMLVP SLPCADAPGT GRQSSLLHAS SSRTNDLE
Best Arabidopsis Sequence Match ( AT3G26300.1 )
(BLAST)
001: MTNIWLLSLI FVICILVAVF NHKNRRNYQR TPPSPPGCPI IGNLHQLGEL PHQSLWKLSK KYGPVMLLKL GRVPTVIVSS SETAKQALKI HDLHCCSRPG
101: FAGARELSYN YLDIAFSPYD DYWKEVRKLA VQELFSSKQV HSIQPIKDEE VKKLIDSISE SAAQKTPINL NKTLLALTVS VVCRTAFSVN FEGTVLNSER
201: FNNIVREALE MLGSFSASDF IPYVGRIIDL LTGLQGRRER SMRDLDAFYE QMFDLHKQKK EEGSEDFVDL LLRLEKEEAV LGNDKLTRNH IKAILMDVLL
301: AGMDTSAITM TWAMAELAKN PRVMKKVQSE IRSQIKNKER ISFDDTDKLE YLKMVIKETW RLHPTTPLLI PREAMSEFEI NGYTIPVKTR LHVNVWAIGR
401: DPDTWKDPEV FLPERFTDNN IDAKGQHFEL LPFGGGRRMC PAVYMGTTMV EFGLANLLYH FDWKLPEGMK VDDIDMEEAP GLTVNKKNEL ILVPTKFLDP
Arabidopsis Description
CYP71B34Cytochrome P450 71B34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP6]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.