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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004363_P001 Maize endoplasmic reticulum 82.8 83.27
TraesCS6D01G119700.1 Wheat endoplasmic reticulum, golgi 57.47 57.69
TraesCS5A01G472300.1 Wheat endoplasmic reticulum, golgi 58.41 57.43
TraesCS5B01G485200.1 Wheat extracellular, plasma membrane 57.09 57.2
TraesCS5B01G485000.1 Wheat endoplasmic reticulum 57.84 57.2
TraesCS6A01G130100.2 Wheat cytosol 39.13 57.02
TraesCS5D01G484900.1 Wheat endoplasmic reticulum, golgi 58.03 56.64
TraesCS6D01G120700.1 Wheat extracellular, golgi 56.33 56.55
TraesCS7D01G539000.1 Wheat endoplasmic reticulum, golgi 55.58 55.89
HORVU5Hr1G112130.1 Barley endoplasmic reticulum, plasma membrane 57.28 55.8
OQU80202 Sorghum mitochondrion 46.12 54.95
TraesCS6B01G051900.1 Wheat endoplasmic reticulum, extracellular 54.25 54.15
HORVU6Hr1G024850.2 Barley golgi 54.25 53.85
TraesCS6B01G052200.1 Wheat endoplasmic reticulum, extracellular 53.5 53.8
TraesCSU01G110100.1 Wheat endoplasmic reticulum 53.5 53.0
Os08t0105800-01 Rice endoplasmic reticulum, golgi 54.44 52.46
TraesCS6B01G158300.1 Wheat plastid 47.83 52.06
OQU80201 Sorghum endoplasmic reticulum, golgi 49.91 51.46
EES13192 Sorghum plastid 50.09 50.19
OQU83504 Sorghum plastid 51.23 50.0
EES13188 Sorghum endoplasmic reticulum, golgi 51.8 49.64
EES13191 Sorghum endoplasmic reticulum, plastid, vacuole 50.09 49.44
EES11971 Sorghum plastid 50.28 49.35
EES13189 Sorghum endoplasmic reticulum, golgi 51.98 49.28
EES14519 Sorghum endoplasmic reticulum, golgi, plastid 51.23 49.27
EES08928 Sorghum extracellular, golgi 50.47 49.17
EER94752 Sorghum extracellular, golgi 48.96 48.5
EES11970 Sorghum endoplasmic reticulum, plasma membrane, plastid 47.83 48.01
EES13194 Sorghum plastid 48.2 47.4
EES11071 Sorghum extracellular, golgi, mitochondrion 49.53 47.21
EES02571 Sorghum peroxisome, plasma membrane, plastid 47.83 46.59
EES06580 Sorghum endoplasmic reticulum, plasma membrane, plastid 47.26 46.3
EER90226 Sorghum endoplasmic reticulum, plasma membrane, plastid 47.64 46.15
OQU92584 Sorghum cytosol 45.37 45.2
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 34.78 45.1
EES19549 Sorghum endoplasmic reticulum 44.23 43.9
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 29.87 43.41
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 36.67 41.81
EES02209 Sorghum endoplasmic reticulum 40.08 41.01
EER97083 Sorghum endoplasmic reticulum 38.56 40.4
EER97084 Sorghum endoplasmic reticulum, plastid 38.37 40.12
EER96688 Sorghum endoplasmic reticulum, plastid 38.19 39.76
GSMUA_Achr11P... Banana mitochondrion 38.19 39.07
EER97082 Sorghum endoplasmic reticulum 37.05 38.74
KXG31508 Sorghum endoplasmic reticulum 39.51 38.49
KXG31510 Sorghum golgi, vacuole 40.08 38.41
EER96611 Sorghum plasma membrane, plastid 37.43 38.15
EES18502 Sorghum endoplasmic reticulum, extracellular 37.05 37.62
KXG31509 Sorghum endoplasmic reticulum 37.05 37.55
EES18503 Sorghum endoplasmic reticulum 36.48 37.48
EES02205 Sorghum endoplasmic reticulum, extracellular 39.32 37.34
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 28.17 36.97
KXG24681 Sorghum endoplasmic reticulum 38.37 36.84
EES02206 Sorghum endoplasmic reticulum, mitochondrion 31.76 35.97
OQU80485 Sorghum plastid 25.33 35.17
OQU87061 Sorghum endoplasmic reticulum, extracellular 27.79 27.53
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8067740UniProt:C5YCP1InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES10457ProteinID:EES10457ProteinID:EES10457.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016491GO:GO:0016705GO:GO:0016709
GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF309
EnsemblPlantsGene:SORBI_3006G022900SUPFAM:SSF48264SignalP:SignalP-noTMUniParc:UPI0001A86AA4RefSeq:XP_002446129.1SEG:seg
Description
hypothetical protein
Coordinates
chr6:+:3979834..3982221
Molecular Weight (calculated)
58385.0 Da
IEP (calculated)
6.916
GRAVY (calculated)
0.117
Length
529 amino acids
Sequence
(BLAST)
001: MVLYLVFLAL LTFVLLRRMA GGASRRSGGN GIHHRLPPSP PGLPIIGHLH LLGSNPHLSL HEIAAGVHGA AEDGFMLLRL GQVRSLVVLS PRAAEAVLRA
101: HDHTFASRPP SAVADIVFSN SDVALAPYGD YWRLVRRLVT THVLSAAKVQ SLRRARQEEV ALVVAKIRDA ASTAAVDMTE VFCVFTNDMV CRAVSGKFFR
201: RLDGRHTAFQ EVINSQVVLI AGFNLDDCFP WLAKVGGGVL ARLLFAKAFT LKKQWDVLLD EIITEHEAKL EEVTDDAGHS QEDDADFVHV LLSLQQEYRL
301: TRQQVKSILV DMFGAGTDTS SILLEYAMIE LIRNPDIMAK VRDEITNNTP KGQEMVKEEN LSNMSYLRAI IKETLRLYPP TPLLLPHFCM EDCEVNGYAI
401: AAGTRVIVNA WALGRDAGAW ERADEFVPER FLDGGGSAAA DFRGRDFKFV PFGAGRRMCP GINFGMAVVE LMLANLLYCF YWELPAGMAP QDVDMSVKYG
501: LTSRRKEKLL LVPRLAGGCS VLSTNLVVE
Best Arabidopsis Sequence Match ( AT3G26300.1 )
(BLAST)
001: MTNIWLLSLI FVICILVAVF NHKNRRNYQR TPPSPPGCPI IGNLHQLGEL PHQSLWKLSK KYGPVMLLKL GRVPTVIVSS SETAKQALKI HDLHCCSRPG
101: FAGARELSYN YLDIAFSPYD DYWKEVRKLA VQELFSSKQV HSIQPIKDEE VKKLIDSISE SAAQKTPINL NKTLLALTVS VVCRTAFSVN FEGTVLNSER
201: FNNIVREALE MLGSFSASDF IPYVGRIIDL LTGLQGRRER SMRDLDAFYE QMFDLHKQKK EEGSEDFVDL LLRLEKEEAV LGNDKLTRNH IKAILMDVLL
301: AGMDTSAITM TWAMAELAKN PRVMKKVQSE IRSQIKNKER ISFDDTDKLE YLKMVIKETW RLHPTTPLLI PREAMSEFEI NGYTIPVKTR LHVNVWAIGR
401: DPDTWKDPEV FLPERFTDNN IDAKGQHFEL LPFGGGRRMC PAVYMGTTMV EFGLANLLYH FDWKLPEGMK VDDIDMEEAP GLTVNKKNEL ILVPTKFLDP
Arabidopsis Description
CYP71B34Cytochrome P450 71B34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP6]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.