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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006203_P001 Maize endoplasmic reticulum 91.7 91.88
Zm00001d006199_P001 Maize plastid 89.33 89.33
EER97083 Sorghum endoplasmic reticulum 89.13 89.31
EER96688 Sorghum endoplasmic reticulum, plastid 87.94 87.6
EER97082 Sorghum endoplasmic reticulum 81.82 81.82
HORVU5Hr1G081270.1 Barley endoplasmic reticulum, vacuole 69.96 70.38
TraesCS5D01G402500.1 Wheat endoplasmic reticulum 69.57 70.26
TraesCS5B01G318200.1 Wheat endoplasmic reticulum 69.57 70.12
TraesCS5B01G318500.1 Wheat plastid 69.76 69.49
TraesCS5D01G323800.1 Wheat endoplasmic reticulum 68.58 69.26
TraesCS5D01G323900.1 Wheat endoplasmic reticulum 68.38 68.79
TraesCS5A01G318000.1 Wheat plastid 69.57 68.75
TraesCS5B01G318100.2 Wheat endoplasmic reticulum, plastid 68.18 68.73
HORVU5Hr1G081260.1 Barley plastid 69.96 68.6
EER96611 Sorghum plasma membrane, plastid 70.16 68.4
TraesCS5A01G317600.1 Wheat endoplasmic reticulum 67.98 68.39
Os09t0530300-01 Rice extracellular, plasma membrane 67.19 67.06
HORVU5Hr1G081250.2 Barley plastid 70.16 66.36
TraesCS5D01G324400.1 Wheat endoplasmic reticulum, plastid 65.61 66.0
TraesCS5A01G318100.1 Wheat endoplasmic reticulum 63.24 65.04
TraesCS5B01G318600.1 Wheat endoplasmic reticulum 65.02 65.02
HORVU5Hr1G081210.1 Barley mitochondrion 66.8 62.02
TraesCS5D01G324300.1 Wheat mitochondrion 70.55 60.82
GSMUA_Achr3P12520_001 Banana extracellular, golgi 37.94 45.5
EES02209 Sorghum endoplasmic reticulum 42.49 41.59
EES19549 Sorghum endoplasmic reticulum 42.29 40.15
KXG31508 Sorghum endoplasmic reticulum 43.08 40.15
EER94752 Sorghum extracellular, golgi 41.9 39.7
EES02205 Sorghum endoplasmic reticulum, extracellular 43.08 39.14
EES11971 Sorghum plastid 41.5 38.96
KXG31509 Sorghum endoplasmic reticulum 40.12 38.89
EES18503 Sorghum endoplasmic reticulum 39.53 38.84
EES10457 Sorghum endoplasmic reticulum, golgi 40.12 38.37
EES11970 Sorghum endoplasmic reticulum, plasma membrane, plastid 39.92 38.33
EES06580 Sorghum endoplasmic reticulum, plasma membrane, plastid 40.51 37.96
EES13192 Sorghum plastid 39.53 37.88
OQU80202 Sorghum mitochondrion 32.81 37.39
KXG31510 Sorghum golgi, vacuole 40.71 37.32
EES13191 Sorghum endoplasmic reticulum, plastid, vacuole 39.13 36.94
OQU83504 Sorghum plastid 38.93 36.35
EER90226 Sorghum endoplasmic reticulum, plasma membrane, plastid 38.34 35.53
EES18502 Sorghum endoplasmic reticulum, extracellular 36.56 35.51
OQU80201 Sorghum endoplasmic reticulum, golgi 35.97 35.48
EES14519 Sorghum endoplasmic reticulum, golgi, plastid 38.54 35.45
EES02571 Sorghum peroxisome, plasma membrane, plastid 37.94 35.36
EES13188 Sorghum endoplasmic reticulum, golgi 38.54 35.33
EES13194 Sorghum plastid 37.55 35.32
EES08928 Sorghum extracellular, golgi 37.75 35.17
EES02206 Sorghum endoplasmic reticulum, mitochondrion 32.41 35.12
KXG24681 Sorghum endoplasmic reticulum 38.14 35.03
EES11071 Sorghum extracellular, golgi, mitochondrion 38.14 34.77
EES13189 Sorghum endoplasmic reticulum, golgi 38.34 34.77
OQU80485 Sorghum plastid 25.1 33.33
OQU92584 Sorghum cytosol 34.59 32.96
OQU87061 Sorghum endoplasmic reticulum, extracellular 26.88 25.47
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8062078UniProt:C5X665InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER97084ProteinID:EER97084ProteinID:EER97084.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016491GO:GO:0016705GO:GO:0016709
GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF108
EnsemblPlantsGene:SORBI_3002G273800SUPFAM:SSF48264unigene:Sbi.20221UniParc:UPI0001A8397DRefSeq:XP_002460563.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:+:65668674..65671325
Molecular Weight (calculated)
55276.0 Da
IEP (calculated)
7.068
GRAVY (calculated)
-0.014
Length
506 amino acids
Sequence
(BLAST)
001: MSPYLLAAGA LIVFLYVIKN RRSSKLPPSP PSLPLIGHLH LIGRLAHRSL HELQLRYGDG GSGLLFLQLG RRPTLVVFTA AAATDLFKNH DLAFASRPRS
101: VGGDKLMYGC SNVSFAPYGE NWRRGKKIAV VHLLSPRRVE SFAPVRAAEV AALVARTRRA AEAGEAVQMR ELLYGYTNAV VTRAATGAAG ATAEKLKQLM
201: GNSAALMAGF QPEDVLPDAP ARFVRWATGL DKKLEDMAEV WDKFLSEIVA AHKEKGGGDA GEEDEDFLDV LLRLREEGAD GLELTDDRIK ATIEDMIAAA
301: TETSSQTLEW TMAELIANPR VLGKLQDEIV RVVNADQPAI CEPDLSRMGY LKAVFKEVLR LHAPAPLLVP HESTTPAVVQ GYEIPAKTAL FVNVWAIGRD
401: PAVWDAPDEF RPERFMGGSR SVDFRGTDYQ LIPFGAGRRI CPGISFAVPV LELALVSLLR HFEWELPAGM RPVDLDMGEA PGLTTPRRVP LVLVPKCRTL
501: VQAALQ
Best Arabidopsis Sequence Match ( AT1G13080.1 )
(BLAST)
001: MTILLCFFLV SLLTIVSSIF LKQNKTSKFN LPPSPSSLPI IGNLHHLAGL PHRCFHKLSI KYGPLVFLRL GSVPVVVISS SEAAEAVLKT NDLECCSRPK
101: TVGSGKLSYG FKDITFAPYG EYWREVRKLA VIELFSSKKV QSFRYIREEE VDFVVKKVSE SALKQSPVDL SKTFFSLTAS IICRVALGQN FNESGFVIDQ
201: DRIEELVTES AEALGTFTFS DFFPGGLGRF VDWLFQRHKK INKVFKELDA FYQHVIDDHL KPEGRKNQDI VTLILDMIDK QEDSDSFKLN MDNLKAIVMD
301: VFLAGIDTSA VTMIWAMTEL IRNPRVMKKA QESIRTTLGL KKERITEEDL GKVEYLNHIL KETFRLHPAL PFVVPRETMS HIKIQGYDIP PKTQIQLNVW
401: TIGRDPKRWN DPEEFNPERF ANSSVDFRGQ HFDLLPFGSG RRICPGMPMA IASVELALMN LLYYFDWSMP DGTKGEDIDM EEAGNISIVK KIPLQLVPVQ
501: RY
Arabidopsis Description
CYP71B2Cytochrome P450 71B2 [Source:UniProtKB/Swiss-Prot;Acc:O65788]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.