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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:
  • plastid 4
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES13188 Sorghum endoplasmic reticulum, golgi 81.45 81.16
EES13189 Sorghum endoplasmic reticulum, golgi 77.82 76.7
Zm00001d035178_P001 Maize endoplasmic reticulum 74.55 74.95
Zm00001d034986_P001 Maize endoplasmic reticulum 73.45 71.25
TraesCS1A01G092100.1 Wheat cytosol 38.91 68.59
OQU80202 Sorghum mitochondrion 53.82 66.67
OQU80201 Sorghum endoplasmic reticulum, golgi 60.91 65.3
TraesCS1D01G100700.1 Wheat endoplasmic reticulum, golgi 61.64 64.08
TraesCS1B01G119900.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid 62.0 63.98
OQU83504 Sorghum plastid 60.73 61.62
EES08928 Sorghum extracellular, golgi 60.73 61.51
TraesCS2D01G148100.1 Wheat mitochondrion 48.73 59.96
TraesCS2B01G169100.1 Wheat endoplasmic reticulum 56.36 58.71
TraesCS2B01G169000.1 Wheat endoplasmic reticulum, golgi, plastid 56.36 58.71
HORVU2Hr1G025480.2 Barley endoplasmic reticulum 54.73 57.55
EES13191 Sorghum endoplasmic reticulum, plastid, vacuole 55.64 57.09
EES13192 Sorghum plastid 53.27 55.49
EES13194 Sorghum plastid 52.36 53.53
EER94752 Sorghum extracellular, golgi 50.73 52.25
EES02571 Sorghum peroxisome, plasma membrane, plastid 51.45 52.12
EES10457 Sorghum endoplasmic reticulum, golgi 49.27 51.23
EES11971 Sorghum plastid 50.0 51.02
EES11970 Sorghum endoplasmic reticulum, plasma membrane, plastid 48.18 50.28
EES06580 Sorghum endoplasmic reticulum, plasma membrane, plastid 48.36 49.26
EES11071 Sorghum extracellular, golgi, mitochondrion 48.91 48.47
EER90226 Sorghum endoplasmic reticulum, plasma membrane, plastid 48.0 48.35
GSMUA_Achr3P22060_001 Banana endoplasmic reticulum, golgi 34.0 45.83
OQU92584 Sorghum cytosol 44.18 45.76
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 29.09 43.96
GSMUA_Achr8P32610_001 Banana endoplasmic reticulum 36.18 42.89
EES19549 Sorghum endoplasmic reticulum 41.45 42.78
KXG31508 Sorghum endoplasmic reticulum 39.27 39.78
EES02209 Sorghum endoplasmic reticulum 37.27 39.65
EER97083 Sorghum endoplasmic reticulum 36.36 39.6
EER96688 Sorghum endoplasmic reticulum, plastid 36.0 38.98
EER97084 Sorghum endoplasmic reticulum, plastid 35.45 38.54
GSMUA_Achr11P... Banana mitochondrion 36.18 38.49
EES18503 Sorghum endoplasmic reticulum 35.64 38.06
EER96611 Sorghum plasma membrane, plastid 35.82 37.96
EER97082 Sorghum endoplasmic reticulum 34.91 37.94
KXG24681 Sorghum endoplasmic reticulum 37.64 37.57
EES02206 Sorghum endoplasmic reticulum, mitochondrion 31.82 37.47
EES02205 Sorghum endoplasmic reticulum, extracellular 37.45 36.98
EES18502 Sorghum endoplasmic reticulum, extracellular 34.91 36.85
KXG31510 Sorghum golgi, vacuole 36.55 36.41
KXG31509 Sorghum endoplasmic reticulum 34.36 36.21
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 25.64 34.99
OQU80485 Sorghum plastid 24.18 34.91
OQU87061 Sorghum endoplasmic reticulum, extracellular 26.91 27.72
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8076543UniProt:C5YN21InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES14519ProteinID:EES14519ProteinID:EES14519.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF163EnsemblPlantsGene:SORBI_3007G034900SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A87AF7RefSeq:XP_002445024.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:3076686..3078784
Molecular Weight (calculated)
61404.3 Da
IEP (calculated)
7.431
GRAVY (calculated)
-0.139
Length
550 amino acids
Sequence
(BLAST)
001: MSHLEVAFQL TSSSLVLAQW LLLLLVPLLL LLHYYSSRRS RSDRRRHGSS SCSDDKQQQQ QLPPSPPGLP IIGHLHLIGG DLPHITLRDL SAKHGRDGLM
101: LLHLGAATTL IVSSPQAAET TMRTHDHVFA SRLVSTVSDD LMYGSSDIAF SPYGEHWRQA RKLVTTHLLA VKKVHSYRSA RKEEVHLVLA NVQAAAAAST
201: AMDMGMVMNM FANDVVSHAV TGKFFRSEGR SKLFRELVEA NSALVGGFNL EYYFPWLARS LGFLSRRFLR KRAQETHKRW DELLETILSD HERKDSAVHR
301: HDDGRGDFTD VLLSVQKEYG MTRDHVKAIL LDMFAAGTDT SSLVLEFAMA ELMCNPQQMA KLQGEVRKHT PSGQETVEEE NLSNMPYLRA VVKETLRMHP
401: PAPLLVPRLS MADCVVDGYC VPSGTRVILN AWALGRDPES WEKPDEFMPE RFMDGGSAAA IDFKGNHFQF LPFGAGRRIC PGINFGMAAV EIMLANLMYC
501: FDWQLPVGME EKGLDMTEVF GVTVHLKEKL MLVPVIPKLR ATSGHSSASC
Best Arabidopsis Sequence Match ( AT3G26300.1 )
(BLAST)
001: MTNIWLLSLI FVICILVAVF NHKNRRNYQR TPPSPPGCPI IGNLHQLGEL PHQSLWKLSK KYGPVMLLKL GRVPTVIVSS SETAKQALKI HDLHCCSRPG
101: FAGARELSYN YLDIAFSPYD DYWKEVRKLA VQELFSSKQV HSIQPIKDEE VKKLIDSISE SAAQKTPINL NKTLLALTVS VVCRTAFSVN FEGTVLNSER
201: FNNIVREALE MLGSFSASDF IPYVGRIIDL LTGLQGRRER SMRDLDAFYE QMFDLHKQKK EEGSEDFVDL LLRLEKEEAV LGNDKLTRNH IKAILMDVLL
301: AGMDTSAITM TWAMAELAKN PRVMKKVQSE IRSQIKNKER ISFDDTDKLE YLKMVIKETW RLHPTTPLLI PREAMSEFEI NGYTIPVKTR LHVNVWAIGR
401: DPDTWKDPEV FLPERFTDNN IDAKGQHFEL LPFGGGRRMC PAVYMGTTMV EFGLANLLYH FDWKLPEGMK VDDIDMEEAP GLTVNKKNEL ILVPTKFLDP
Arabidopsis Description
CYP71B34Cytochrome P450 71B34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP6]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.