Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G066930.5 | Barley | cytosol | 95.74 | 3.95 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 65.96 | 2.73 |
| HORVU3Hr1G035170.2 | Barley | cytosol | 57.45 | 2.39 |
| KXG21335 | Sorghum | cytosol | 10.64 | 0.55 |
| GSMUA_Achr1P15460_001 | Banana | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| HORVU4Hr1G034270.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G036010.9 | Barley | plastid | 0.0 | 0.0 |
| HORVU7Hr1G022450.2 | Barley | cytosol, nucleus, peroxisome, plastid | 0.0 | 0.0 |
| PGSC0003DMT400036656 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400036657 | Potato | cytosol, mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400077797 | Potato | cytosol | 0.0 | 0.0 |
| Solyc03g117370.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc03g117410.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| VIT_04s0008g06350.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G022460.1 | EnsemblPlantsGene:HORVU7Hr1G022460 | GO:GO:0001172 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003968 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0039694 | InterPro:IPR007094 | InterPro:RNA-dir_pol_PSvirus | InterPro:Topless_fam | PANTHER:PTHR44083 |
| PANTHER:PTHR44083:SF5 | PFscan:PS50507 | UniParc:UPI000B47AD6E | UniProt:A0A287VNY4 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr7H:-:32826274..32826608
Molecular Weight (calculated)
5144.1 Da
IEP (calculated)
4.696
GRAVY (calculated)
-0.104
Length
47 amino acids
Sequence
(BLAST)
(BLAST)
1: QIYTFVPNGE LRQQAEIDAH IGGVNDIAFS HTNKSLSIIT CGDDKLI
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
Arabidopsis Description
TPR3TOPLESS-related 3 [Source:UniProtKB/TrEMBL;Acc:F4K2T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.