Factsheet for HORVU3Hr1G035170.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G179800.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.32	97.8
TraesCS3B01G204200.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.23	97.71
TraesCS3A01G173300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.23	97.71
Os01t0254100-01	Rice	nucleus	88.5	88.57
KXG32191	Sorghum	cytosol	87.61	88.0
Zm00001d040279_P012	Maize	cytosol	87.43	87.82
GSMUA_Achr11P...	Banana	cytosol	75.49	75.15
HORVU4Hr1G034270.1	Barley	cytosol	5.04	75.0
GSMUA_Achr2P00320_001	Banana	cytosol	78.32	74.18
HORVU7Hr1G066930.5	Barley	cytosol	62.92	62.48
HORVU6Hr1G036010.9	Barley	plastid	9.65	62.29
HORVU0Hr1G008690.1	Barley	cytosol, endoplasmic reticulum	61.68	61.36
HORVU7Hr1G022460.1	Barley	cytosol	2.39	57.45
Zm00001d008338_P001	Maize	cytosol	67.17	54.57
VIT_04s0008g06360.t01	Wine grape	cytosol	3.27	48.05
HORVU7Hr1G022450.2	Barley	cytosol, nucleus, peroxisome, plastid	7.7	40.47
VIT_04s0008g06370.t01	Wine grape	cytosol	10.0	31.74

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EMBL:AK364830	EMBL:AK372216	InterPro:CTLH_C
UniProt:F2DLR2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G035170	EnsemblPlants:HORVU3Hr1G035170.2
InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897
PANTHER:PTHR44083	PANTHER:PTHR44083:SF3	InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SMART:SM00667	SMART:SM00668
SUPFAM:SSF101908	SUPFAM:SSF50998	InterPro:Topless_fam	UniParc:UPI000200692A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DLR2]

Coordinates

chrchr3H:-:195194141..195204867

Molecular Weight (calculated)

124945.0 Da

IEP (calculated)

7.275

GRAVY (calculated)

-0.348

Length

1130 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNIKY FEEKVHAGEW DEVERYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR AKAVDILVKD
0101: LKVFSTFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR GIMLIELKKL IEANPLFREK LVFPTLKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCSPPNGA RTSPVSVPLA AVPKAGAAYQ PLTGHPPFQP PPPAGPSLAG WMTSATVSSS IQSAAVAASS MSVQPNQGMM KRPAISDYQS AESEQLMKRL
0301: RPGGHGIDEA TYPAPTPQPS WSLDDLPRTV ACTLSQGSNV TSMDFHPSRH TLLLVGSANG EFTLWEIGLR ERLVSKPFKI WDMQACSAQF QSVLAKDSSM
0401: PINRVTWSPD GDLIGVAFAK HLIHLHAYQQ PNETRQVLEI EAHSGGVNDI AFSRPNKQLC VVTCGDDKLI RVWDMHGQKI YSFEGHEAPV YSICPHHKET
0501: IQFIFSTSID GKIKAWLYDN AGSRVDYDAP GKWCTTMLYS ADGTRLFSCG TSKEGDSHLV EWNESEGSIK RTYSGFRKKA SGVVQGVVQF DTAQNHILAA
0601: GEDSQIKFWD VDNTNMLTCI DADGGLPGLP RLRFNKEGNL LAVTTVDNGF KILANSDGLR SLRAFGNRPF EAFRSPYEAS AMKVSGAPVV AGISPNIGRM
0701: DNLDRNSPAK PSPILNGADP ASRSIDIKPR ISEEKPDKAK PWELMEVLNP QQFRVATLPE TPDQASKVVR LLYTNSGVGL LALGSNAIQR LWKWNRNEQN
0801: PNGKATASVV PQHWQPNSGL VMANDIGETP PEESVPCIAL SKNDSYVMSA CGGKVSLFNM MTFKVMTTFM PPPPASTFLA FHPQDNNIIA IGMEDSTIHI
0901: YNVRVDEVKI RLKGHQKRIT GLAFSNSLHI LVSSGADAQL CVWATDSWEK KKSVAIQMPA GKAPLGDTRV QFNSDQNRLL VVHETQIAIY DASKMERIYQ
1001: WIPQGTLSAG ISHASYSCNS QLVFAAFTDG NVAIFDADNL RLRCRIASSA YMSTAAINSN PPIYPFVVAA HPQEPNQFAV GLSDGSVKVM EPLESDGKWG
1101: TPAPVENGVA NGRVPASSAT SNPATDQNQR

Best Arabidopsis Sequence Match ( AT3G16830.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFFFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR SIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCSPSNGA RALTPVNLPV AAVARPSNFV PLGVHGGPFQ SNPAPAPNAN ALAGWMANPN PSSSVPSGVV AASPFPMQPS QVNELKHPRA PSNSLGLMDY
0301: QSADHEQLMK RLRSAQTSNE VTYPAHSHPP ASLDDLPRNV VSTIRQGSVV ISMDFHPSHH TLLAVGCSSG EVTLWEVGSR EKVVTEPFKI WNMAACSVIF
0401: QGSIVKEPSI SVTRVAWSPD GNLLGVSFTK HLIHVYAYQG SDLRQHLEID AHVGCVNDLA FAHPNKQMCV VTCGDDKLIK VWDLSGKKLF TFEGHEAPVY
0501: SICPHQKENI QFIFSTALDG KIKAWLYDNV GSRVDYDAPG QWCTTMLYSA DGSRLFSCGT SKEGDSFLVE WNESEGALKR TYLGFRKKSA GVVQFDTTRN
0601: RFLAVGEDNQ IKFWNMDNTN LLTVVEAEGG LPNLPRLRFN KDGNLLAVTT ADNGFKILAN TDGLRTLRAF EARSFEASKA SIDMKVSTSA MASSISPAIG
0701: KIEHMDAGSP ARPTPIPNGI EAMSRTMEKP RNLDSVDKSK PLELTEIVDP TQCRQVTMPD SKDSVSKVAR LLYTNSGVGV LALGSNGVQR LWKWIRNEQN
0801: PTGKATASVT PQHWQPNSGL LMANDVPENP EGSVPCIALS KNDSYVMSAC GGKVSLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSSIHIY
0901: NVRVDEVKTK LKGHQKHITG LAFSTALNIL VSSGADAQLF FWTADSWEKK KSSAIQLPPG KAPVGDTRVQ FHNDQIQLLV SHETQLAIYD ASKMECIHKW
1001: VPQEALSSPI TSASYSCNSQ LVYASFADGN IAVFDAESLR LRCRIAPSAY MPQPTPNSAP IFPQVITAHP QEPNQLAVGL SDGSVKVIEP SELSRRWGVG
1101: VAAGSDKAGT ENGRPSSSSA ANNSSSDQIQ R

Arabidopsis Description

TPR2Topless-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.