CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34855	Soybean	cytosol	77.14	75.07
KRH37595	Soybean	cytosol	45.45	73.01
KRH70185	Soybean	cytosol	53.17	47.07
KRH19256	Soybean	cytosol	54.55	44.59
PGSC0003DMT400062295	Potato	cytosol	28.65	23.74
Solyc06g051320.2.1	Tomato	cytosol, plastid	28.65	23.69
KRH46964	Soybean	cytosol	27.55	23.58
KRH28761	Soybean	cytosol	28.1	23.56
KRH58729	Soybean	plastid, vacuole	23.42	22.67
PGSC0003DMT400060369	Potato	cytosol	27.82	22.6
KRH48085	Soybean	mitochondrion	10.47	21.59
KRH65347	Soybean	cytosol, nucleus, peroxisome	25.62	21.48
KRH06600	Soybean	cytosol	26.72	21.32
KRH10465	Soybean	cytosol	25.62	21.23
KRH32587	Soybean	cytosol	26.45	20.6
KRH42621	Soybean	cytosol, golgi, plastid	25.9	19.71

Protein Annotations

EMBL:ACUP02012715	EnsemblPlants:KRG91924	EnsemblPlantsGene:GLYMA_20G180700	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF16	PFAM:PF02458	ProteinID:KRG91924	ProteinID:KRG91924.1	UniParc:UPI0006ED5077	UniProt:A0A0R0EPV0
MapMan:50.2.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:41877239..41881379

Molecular Weight (calculated)

41183.8 Da

IEP (calculated)

6.503

GRAVY (calculated)

-0.138

Length

363 amino acids

Sequence
(BLAST)

001: MSAYFNFTKR KSLSFPNSFN SYLPMVMFYP NKEGFREPSH ICAQLKQSLF ETLTICYPVS GRREDHTFIT CNDEGALYLE AKVNLNLIEF LTPPKLEFLN
101: KLFPCEPNKM HSHRETLPQV LVQVNIFNCG GIAIGTCNLH TLLDAIFRGS REEVAFPDLS SASSFFPPLN HLSLHDHVDQ NNEDSSAQKM CTTRRYEALA
201: AFIWKHMTLA CKMESDSTRP AVAIHIVDMR KRIGEPFSRY TIGNILWPMM VFCEKVNADT SVRYLVSIAR EKFGKLSREL FLIVKSDPNI LGSTQCMDLP
301: QGIETRSPIP MTSWCGLNFS GLDFGFGKPL WVGVRGGDQE TLPNVAVIME TDEGMEAWLT MEM

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.