CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70185	Soybean	cytosol	88.96	96.34
KRH34855	Soybean	cytosol	47.52	56.57
KRG91924	Soybean	mitochondrion, plastid	44.59	54.55
KRH37595	Soybean	cytosol	24.55	48.23
Solyc06g051320.2.1	Tomato	cytosol, plastid	33.33	33.71
PGSC0003DMT400062295	Potato	cytosol	32.88	33.33
KRH06600	Soybean	cytosol	33.11	32.31
KRH32587	Soybean	cytosol	32.66	31.12
PGSC0003DMT400060369	Potato	cytosol	31.08	30.87
KRH28761	Soybean	cytosol	29.28	30.02
KRH48085	Soybean	mitochondrion	11.71	29.55
KRH58729	Soybean	plastid, vacuole	24.32	28.8
KRH46964	Soybean	cytosol	27.48	28.77
KRH65347	Soybean	cytosol, nucleus, peroxisome	27.93	28.64
KRH10465	Soybean	cytosol	28.15	28.54
KRH42621	Soybean	cytosol, golgi, plastid	29.05	27.04

Protein Annotations

EMBL:ACUP02008171	EnsemblPlants:KRH19256	EnsemblPlantsGene:GLYMA_13G108000	EntrezGene:102667966	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31623	PANTHER:PTHR31623:SF16	PFAM:PF02458	ProteinID:KRH19256	ProteinID:KRH19256.1	SEG:seg
UniParc:UPI00023CFD42	UniProt:I1LY34	MapMan:50.2.3	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:22236896..22238230

Molecular Weight (calculated)

50154.9 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.093

Length

444 amino acids

Sequence
(BLAST)

001: MEINITSRET IKPSLSTSTE FKTHKLCLFD VFQLNTYFPL ILFYDNTTNA KGFSYVSTQL KKSLSEALTI FYPLGGRRGD FFSIYCNDEG AIYMEASVNI
101: NMEEFLNPPK LELLNKLLPC EPNKCHPCQE VLPQLLVQVN LFQCGGIAIG MCNLHILLDA YSCSAFLKTW FAICKGSKEE ISSWPDFISA SSFFPPRNTI
201: GVRAGMLNIN KDSNVEAKCT TRRFLFDSKS INKLESMSSS DETKPTRYQA VSSFMCKHMI LACTKECCDT KRPMVALHVV DMRKRMGEPF SKGAIGNLLW
301: PALVLLEDVN KNTNIRDLVR VLKEGLGKLT KELFLKVQND PRFLWSDECA QLMLEGIATK NPITFVFTSW ANMGFNEVDF GRGKPLWLAQ RGGTKETIPN
401: TVVLMETKEG IEAWVTMAEK HIANLENDMD FLQFSLVNPS VSNI

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.