Factsheet for Solyc06g051320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20363867

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062295	Potato	cytosol	94.76	94.98
Solyc05g050760.1.1	Tomato	cytosol	13.9	37.89
KRH70185	Soybean	cytosol	32.57	34.88
KRH19256	Soybean	cytosol	33.71	33.33
Solyc06g071940.1.1	Tomato	cytosol	13.44	33.15
Solyc05g014330.1.1	Tomato	extracellular	30.98	31.55
Solyc04g082350.1.1	Tomato	mitochondrion	33.03	31.12
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	15.49	30.91
KRH34855	Soybean	cytosol	25.97	30.56
Solyc01g008300.1.1	Tomato	cytosol	18.0	28.83
KRG91924	Soybean	mitochondrion, plastid	23.69	28.65
Solyc07g043700.1.1	Tomato	plastid	27.79	28.44
Solyc08g075200.1.1	Tomato	plastid	7.97	28.0
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	28.47	27.53
Solyc02g081800.1.1	Tomato	cytosol, plastid	26.88	27.38
Solyc07g052060.2.1	Tomato	cytosol	16.63	27.04
KRH37595	Soybean	cytosol	13.9	26.99
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	27.33	26.91
Solyc07g006680.1.1	Tomato	cytosol	27.33	26.55
Solyc11g067290.1.1	Tomato	plastid	25.74	26.46
Solyc01g105550.1.1	Tomato	cytosol	27.11	26.33
Solyc08g075180.1.1	Tomato	cytosol	15.72	26.24
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	25.28	26.06
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	25.51	25.99
Solyc12g096790.1.1	Tomato	cytosol	26.42	25.89
Solyc11g067330.1.1	Tomato	plastid	25.51	25.87
Solyc10g079570.1.1	Tomato	cytosol	19.59	25.75
Solyc07g043710.2.1	Tomato	plastid	25.51	25.69
Solyc08g014490.1.1	Tomato	mitochondrion	25.51	25.69
Solyc01g105580.1.1	Tomato	cytosol	25.74	25.68
Solyc01g105590.2.1	Tomato	cytosol	26.42	25.66
Solyc11g067340.1.1	Tomato	plastid	25.06	25.4
Solyc02g081740.1.1	Tomato	plastid	25.28	25.4
Solyc07g006670.1.1	Tomato	cytosol	26.65	25.38
Solyc12g096770.1.1	Tomato	cytosol	25.28	25.17
Solyc12g010980.1.1	Tomato	cytosol	25.51	25.17
Solyc08g075210.1.1	Tomato	plastid	23.92	24.76
Solyc12g005430.1.1	Tomato	cytosol, nucleus, peroxisome	25.51	24.51
Solyc07g008380.1.1	Tomato	cytosol	24.6	24.27
Solyc02g081760.1.1	Tomato	plastid	23.92	23.97
Solyc12g005440.1.1	Tomato	cytosol, golgi, peroxisome	23.92	23.92
Solyc11g067270.1.1	Tomato	mitochondrion	23.23	23.72
Solyc12g096800.1.1	Tomato	cytosol	24.15	23.09
Solyc02g081750.1.1	Tomato	plastid	24.83	23.09
Solyc02g081770.1.1	Tomato	cytosol	23.23	22.92
Solyc05g039950.1.1	Tomato	extracellular	20.27	22.53
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	23.92	22.39
Solyc11g069680.1.1	Tomato	nucleus	24.15	22.36
Solyc11g067350.1.1	Tomato	plastid	8.88	20.53

Protein Annotations

EnsemblPlants:Solyc06g051320.2.1	EnsemblPlantsGene:Solyc06g051320.2	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623	PANTHER:PTHR31623:SF16
PFAM:PF02458	SEG:seg	UniParc:UPI0002766EE3	UniProt:K4C5S5	MapMan:50.2.3	:

Description

No Description!

Coordinates

chr6:+:34562723..34564882

Molecular Weight (calculated)

49567.5 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.069

Length

439 amino acids

Sequence
(BLAST)

001: MDVKVISEEI IKPCIPTPRH LRNYKISFID QFTPCSYIPV ILFYNANDDV DHELKPMQVA LAETLSYYYP LAGRFKDVYS IECNDEGVVY VEAQANFNLS
101: KFLQNPDIPF LNKFLPFKGN CLEPSYNQPL VALQTTAFEC GGMAIGVCML HKVVDASTMS VFLKTWAKIS RGEGDKTLHP DFTSAISLFP PIDSLPTKFI
201: TDFDNFYFQG SKSPMRRFLF DSKSIKALKA NTSSESVPFP SKIEALTAFI CKRIGAALMA NNVPKTLMIT HAANLRPRVD PPLPQKTFGN LLWLAFAFYD
301: PLDTNNELPD LGIMLREVFA QLTAENIKDI DSECVFESLS EVLESLSTNE NIKTYRFTSW CNMGLYDVNF GWGKPVWVAH MGDLPAANVR SKQQFVFIES
401: ASRQGIELWV ASDEEEIRFL EKDAEFLAYA NPNPSICIN

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.