Factsheet for Solyc08g075210.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g075200.1.1	Tomato	plastid	22.88	77.6
PGSC0003DMT400023800	Potato	cytosol, plastid	67.69	73.4
Solyc08g075180.1.1	Tomato	cytosol	38.21	61.6
Solyc10g079570.1.1	Tomato	cytosol	32.55	41.32
Solyc11g067270.1.1	Tomato	mitochondrion	40.8	40.23
Solyc11g067330.1.1	Tomato	plastid	40.57	39.72
Solyc11g067340.1.1	Tomato	plastid	40.33	39.49
Solyc07g043710.2.1	Tomato	plastid	40.33	39.22
Solyc07g043700.1.1	Tomato	plastid	39.39	38.93
Solyc11g067290.1.1	Tomato	plastid	38.44	38.17
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	39.86	37.89
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	37.5	37.32
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	18.87	36.36
Solyc05g039950.1.1	Tomato	extracellular	33.73	36.2
Solyc02g081800.1.1	Tomato	cytosol, plastid	36.56	35.96
Solyc08g014490.1.1	Tomato	mitochondrion	35.85	34.86
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	35.38	34.8
Solyc02g081740.1.1	Tomato	plastid	34.43	33.41
Solyc02g081760.1.1	Tomato	plastid	34.43	33.33
Solyc11g069680.1.1	Tomato	nucleus	35.85	32.07
Solyc02g081750.1.1	Tomato	plastid	35.61	31.99
Solyc11g067350.1.1	Tomato	plastid	14.15	31.58
VIT_01s0010g02330.t01	Wine grape	cytosol	28.07	29.9
KRH58729	Soybean	plastid, vacuole	26.18	29.6
Solyc05g014330.1.1	Tomato	extracellular	28.54	28.07
KRH42621	Soybean	cytosol, golgi, plastid	31.37	27.88
Solyc01g008300.1.1	Tomato	cytosol	17.92	27.74
Solyc05g050760.1.1	Tomato	cytosol	9.91	26.09
Solyc01g105580.1.1	Tomato	cytosol	26.65	25.68
Solyc01g105590.2.1	Tomato	cytosol	25.94	24.34
Solyc04g082350.1.1	Tomato	mitochondrion	26.65	24.25
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	25.71	24.01
Solyc06g051320.2.1	Tomato	cytosol, plastid	24.76	23.92
Solyc01g105550.1.1	Tomato	cytosol	25.24	23.67
Solyc07g006680.1.1	Tomato	cytosol	25.24	23.67
Solyc07g052060.2.1	Tomato	cytosol	14.86	23.33
Solyc12g096790.1.1	Tomato	cytosol	24.29	22.99
Solyc07g006670.1.1	Tomato	cytosol	24.53	22.56
Solyc12g005430.1.1	Tomato	cytosol, nucleus, peroxisome	24.06	22.32
Solyc07g008380.1.1	Tomato	cytosol	23.11	22.02
Solyc12g096770.1.1	Tomato	cytosol	22.88	22.0
Solyc06g071940.1.1	Tomato	cytosol	9.2	21.91
Solyc12g096800.1.1	Tomato	cytosol	23.58	21.79
Solyc02g081770.1.1	Tomato	cytosol	22.41	21.35
Solyc12g010980.1.1	Tomato	cytosol	22.17	21.12
Solyc12g005440.1.1	Tomato	cytosol, golgi, peroxisome	21.7	20.96
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	22.88	20.68

Protein Annotations

EnsemblPlants:Solyc08g075210.1.1	EnsemblPlantsGene:Solyc08g075210.1	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623	PANTHER:PTHR31623:SF6
PFAM:PF02458	SEG:seg	UniParc:UPI000276B4F3	UniProt:K4CMN8	MapMan:50.2.3	:

Description

No Description!

Coordinates

chr8:-:59331821..59333095

Molecular Weight (calculated)

47063.3 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.148

Length

424 amino acids

Sequence
(BLAST)

001: MTASSFVSMA EKIIKPHSPT PFSVKRYNLC LMDEIMVPVY MPIVAFYPNP SKTPEQVSNI LEDSLSKVLS SYYPFAGTLG SDNATFVDCN DRGAKSIQVR
101: YDCPMSEIVN LPDTGPEYLP FAKGTPWSST PEEQSLLVVQ LSHFNCGGLG ISARLSHKIA DGCTLANFIS DWASVARDDN ANIPSPQLIG SSIFPPFTEM
201: RIHTDTNVDY EFYNLPVCKK RYLFSNAKLE MLKTQVESET GVQNPTRIEV LSALIYKCAV TANSSSFRPS SLSLPVNLRP ILNPPLETRT VGNIISFIKV
301: ETTSEDEMTI GRVVREIRKG KDELKQEGGV KKEKLVSLWS EWIHSIDLYR SSSVCNYPLN NLDFGWGKPN RVAIPVFGVA NTCMFMDNLS GDGIEVIIAL
401: PEKDATQFEN SKELLHFASP VTNL

Best Arabidopsis Sequence Match ( AT3G30280.1 )
(BLAST)

001: METMKVETIA KEIIKPSSTT PNDLQTLQLS IYDHILPPVY TVAFLFYTKD DLISPEQSSH KLKTSLAETL TKFYPLAGRI KGVTIDCNDE GAVFVDARVN
101: NYPLSDFLRS PDFKTLQQLL PLDVIDDPYE AATTWPLLLV KATYFPCGGM AIGLCITHKI ADATSISTFI QSWAAMARGE AGDIVADPVF AAANFYPPAN
201: ELFKFPVDEN ANKISQITKR FVFSASKLEE LRTKAASEDF VGRPKRVESV TALLWKAFVA AASSNTNACD MKVLIQPSNL RPKIPSLLAE SLIGNIMFSS
301: VVLGISQQEE IKIEKAVRDL RKQGDDLQNV IKEEGGSSSA MIGSKLANLM LTNYSKLSYE THEPYTVSSW CKLPLYEASF GWGSPVWIAG NVAPMLENVT
401: MLIDSKDGQG IEAFVTLPEE NMLSLEQNTE LLAFASVNPS VLV

Arabidopsis Description

Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LI71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.