Factsheet for Solyc11g069680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095666	Potato	mitochondrion	49.16	88.26
PGSC0003DMT400050667	Potato	plastid	57.17	87.42
PGSC0003DMT400092881	Potato	mitochondrion	68.14	85.9
PGSC0003DMT400086928	Potato	extracellular	26.37	79.62
PGSC0003DMT400092060	Potato	cytosol	67.09	73.61
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	27.0	58.18
Solyc08g014490.1.1	Tomato	mitochondrion	41.56	45.18
Solyc08g075200.1.1	Tomato	plastid	10.34	39.2
Solyc02g081740.1.1	Tomato	plastid	36.08	39.13
Solyc02g081760.1.1	Tomato	plastid	35.65	38.58
Solyc02g081800.1.1	Tomato	cytosol, plastid	34.6	38.05
Solyc07g043700.1.1	Tomato	plastid	33.76	37.3
Solyc02g081750.1.1	Tomato	plastid	36.5	36.65
Solyc07g043710.2.1	Tomato	plastid	33.12	36.01
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	33.76	35.87
Solyc08g075210.1.1	Tomato	plastid	32.07	35.85
Solyc10g079570.1.1	Tomato	cytosol	25.11	35.63
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	32.28	35.5
Solyc05g039950.1.1	Tomato	extracellular	29.54	35.44
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	31.43	34.98
Solyc11g067270.1.1	Tomato	mitochondrion	30.17	33.26
Solyc11g067330.1.1	Tomato	plastid	29.75	32.56
Solyc11g067340.1.1	Tomato	plastid	29.11	31.87
Solyc11g067290.1.1	Tomato	plastid	28.48	31.62
KRH58729	Soybean	plastid, vacuole	24.89	31.47
VIT_01s0010g02330.t01	Wine grape	cytosol	25.32	30.15
KRH42621	Soybean	cytosol, golgi, plastid	29.96	29.77
Solyc08g075180.1.1	Tomato	cytosol	15.82	28.52
Solyc07g006680.1.1	Tomato	cytosol	25.32	26.55
Solyc05g014330.1.1	Tomato	extracellular	23.84	26.22
Solyc05g050760.1.1	Tomato	cytosol	8.86	26.09
Solyc11g067350.1.1	Tomato	plastid	10.34	25.79
Solyc04g082350.1.1	Tomato	mitochondrion	25.32	25.75
Solyc07g006670.1.1	Tomato	cytosol	24.68	25.38
Solyc01g105580.1.1	Tomato	cytosol	23.21	25.0
Solyc01g008300.1.1	Tomato	cytosol	14.35	24.82
Solyc12g096800.1.1	Tomato	cytosol	23.84	24.62
Solyc06g051320.2.1	Tomato	cytosol, plastid	22.36	24.15
Solyc07g052060.2.1	Tomato	cytosol	13.5	23.7
Solyc12g096770.1.1	Tomato	cytosol	21.94	23.58
Solyc02g081770.1.1	Tomato	cytosol	21.73	23.15
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	22.15	23.13
Solyc01g105590.2.1	Tomato	cytosol	21.94	23.01
Solyc12g096790.1.1	Tomato	cytosol	21.73	22.99
Solyc12g005430.1.1	Tomato	cytosol, nucleus, peroxisome	21.94	22.76
Solyc12g010980.1.1	Tomato	cytosol	20.46	21.8
Solyc01g105550.1.1	Tomato	cytosol	20.46	21.46
Solyc06g071940.1.1	Tomato	cytosol	7.81	20.79
Solyc12g005440.1.1	Tomato	cytosol, golgi, peroxisome	18.57	20.05
Solyc07g008380.1.1	Tomato	cytosol	18.57	19.78
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	18.99	19.19

Protein Annotations

EnsemblPlants:Solyc11g069680.1.1	EnsemblPlantsGene:Solyc11g069680.1	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623	PANTHER:PTHR31623:SF6
PFAM:PF02458	SEG:seg	UniParc:UPI00027693D0	UniProt:K4DAC4	MapMan:50.2.3	:

Description

No Description!

Coordinates

chr11:+:54297762..54299186

Molecular Weight (calculated)

53226.9 Da

IEP (calculated)

5.976

GRAVY (calculated)

-0.376

Length

474 amino acids

Sequence
(BLAST)

001: MSSFSRLLST ISKKVVKPFS PTPSTQKIHK LSLLDQCMGN FYMPLVLFYP KHQLEQGPKQ LSKLLETSFS KVLTYHQPWA GSLRDNATIH CDGTGAEFFE
101: VEVNCPMNQI VHRPDLTFPP GLPWKNVPHV NDGGRLSVAQ LSHFDCGGIA ISVCMSHKVG DARSAFSFLK DWATLTREQS NDQLSCPSNS NDQLSCPSYY
201: VQDSLMPSLP DGPLKFPVVV EPNGEESIEF EKRFFLSESN IRALKALIVD DPSSIVQNPT TTEVVSAIVY KCAAIAGANT SNGNNDSSSQ MVFVSDLRKT
301: IPPSIKSTST IGNILTTFST PTYNLEDLRL PKLVADIRKS KHELSTRDNF NENRWVSEMI EYANKINTGT EYELSYRRES SSHDVYRCSS VCNIPFQDLD
401: FGWGRPTRAS IASTPFNNMI YLMNTQDQNR GIEVFINLDQ QQMSIFEQDK EFLQFASPVG DNNFHEDKEK LCCL

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.