Factsheet for Solyc12g005430.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 3
peroxisome 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034258	Potato	extracellular, nucleus, peroxisome, plastid	60.39	88.18
PGSC0003DMT400046325	Potato	peroxisome	77.02	86.49
PGSC0003DMT400034254	Potato	cytosol	58.64	80.72
Solyc02g081770.1.1	Tomato	cytosol	67.4	69.21
Solyc07g052060.2.1	Tomato	cytosol	40.7	68.89
Solyc12g005440.1.1	Tomato	cytosol, golgi, peroxisome	62.8	65.38
Solyc12g096790.1.1	Tomato	cytosol	50.33	51.34
Solyc12g096770.1.1	Tomato	cytosol	49.23	51.02
Solyc12g096800.1.1	Tomato	cytosol	47.48	47.28
Solyc12g010980.1.1	Tomato	cytosol	44.64	45.84
Solyc07g008380.1.1	Tomato	cytosol	40.48	41.57
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	40.48	39.45
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	37.42	37.67
Solyc01g105580.1.1	Tomato	cytosol	28.67	29.77
Solyc01g105550.1.1	Tomato	cytosol	29.1	29.42
Solyc01g105590.2.1	Tomato	cytosol	28.45	28.76
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	13.79	28.64
Solyc05g014330.1.1	Tomato	extracellular	26.48	28.07
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	26.26	26.91
Solyc07g043700.1.1	Tomato	plastid	25.16	26.81
Solyc08g014490.1.1	Tomato	mitochondrion	25.16	26.38
Solyc07g043710.2.1	Tomato	plastid	24.73	25.92
Solyc08g075200.1.1	Tomato	plastid	7.0	25.6
Solyc01g008300.1.1	Tomato	cytosol	15.32	25.55
Solyc11g067290.1.1	Tomato	plastid	23.85	25.53
Solyc06g051320.2.1	Tomato	cytosol, plastid	24.51	25.51
Solyc10g079570.1.1	Tomato	cytosol	18.6	25.45
Solyc02g081740.1.1	Tomato	plastid	24.07	25.17
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	23.41	25.12
Solyc11g067330.1.1	Tomato	plastid	23.63	24.94
Solyc05g050760.1.1	Tomato	cytosol	8.75	24.84
Solyc07g006680.1.1	Tomato	cytosol	24.51	24.78
Solyc04g082350.1.1	Tomato	mitochondrion	25.16	24.68
Solyc02g081800.1.1	Tomato	cytosol, plastid	23.19	24.59
Solyc02g081760.1.1	Tomato	plastid	23.41	24.43
Solyc07g006670.1.1	Tomato	cytosol	24.51	24.3
Solyc08g075210.1.1	Tomato	plastid	22.32	24.06
Solyc11g067340.1.1	Tomato	plastid	22.76	24.02
Solyc11g067270.1.1	Tomato	mitochondrion	22.54	23.95
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	22.1	23.43
Solyc02g081750.1.1	Tomato	plastid	24.07	23.31
Solyc06g071940.1.1	Tomato	cytosol	8.97	23.03
Solyc11g069680.1.1	Tomato	nucleus	22.76	21.94
Solyc05g039950.1.1	Tomato	extracellular	18.38	21.27
Solyc08g075180.1.1	Tomato	cytosol	11.82	20.53
Solyc11g067350.1.1	Tomato	plastid	8.32	20.0

Protein Annotations

EnsemblPlants:Solyc12g005430.1.1	EnsemblPlantsGene:Solyc12g005430.1	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623	PANTHER:PTHR31623:SF16
PFAM:PF02458	UniParc:UPI000276A2FB	UniProt:K4DB81	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr12:+:260587..261960

Molecular Weight (calculated)

51529.2 Da

IEP (calculated)

7.135

GRAVY (calculated)

-0.099

Length

457 amino acids

Sequence
(BLAST)

001: MEIGFVNEND CIKVEILCKK LIKPSSPTPS QNQRYKLSFF DQIAEREHIP VVLFYPYNNI NSHTIDERLE KSLSDVLTHV YPAAGRYDDN AECSILCLDQ
101: GVSYTKAKVN CKLGNFLEKT RKDLSVATLF GPHENKNMDQ NNFMVSPIVI IQVTKFECGG LALSFSVSHP AMDGFTGLQF LFGWGKVCRL GTPIDKIHFL
201: SFNLGNIFPT RDTSALFNSA DVVNREENIV VKRFVVREAA LSRLKKQCID ESGGALTFQP SRVEIVTAIL WRAFIRASAA RNGFVRPSLM DFPLNLRSKS
301: SLPQVKTSMG NFRIDVPIKF IPGETKMELH NFITLIRNTM NKVVASFAKP SPDEIVSTLV NIYNQSFTSP EWGGNNEIDK VACSSLCKFP LQDIDFGLGK
401: PSLVYFGLKD MEIFWLYDTD CHTSEIGVQL DLKESTMQLF ECDNDIKALM FIRDAKL

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.