Factsheet for Solyc11g067340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g067330.1.1	Tomato	plastid	87.99	87.99
PGSC0003DMT400019151	Potato	cytosol	63.74	83.38
PGSC0003DMT400067792	Potato	cytosol	63.28	82.78
PGSC0003DMT400067789	Potato	mitochondrion, plastid	82.45	82.45
Solyc11g067350.1.1	Tomato	plastid	34.87	79.47
Solyc11g067290.1.1	Tomato	plastid	54.27	55.04
Solyc11g067270.1.1	Tomato	mitochondrion	54.27	54.65
Solyc07g043700.1.1	Tomato	plastid	46.42	46.85
Solyc08g075200.1.1	Tomato	plastid	12.47	43.2
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	20.55	40.45
Solyc08g075210.1.1	Tomato	plastid	39.49	40.33
Solyc07g043710.2.1	Tomato	plastid	40.18	39.91
Solyc10g079570.1.1	Tomato	cytosol	28.64	37.13
Solyc02g081800.1.1	Tomato	cytosol, plastid	36.95	37.12
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	36.03	36.19
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	36.72	35.65
Solyc08g075180.1.1	Tomato	cytosol	20.79	34.22
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	33.49	34.04
Solyc08g014490.1.1	Tomato	mitochondrion	33.95	33.72
Solyc02g081740.1.1	Tomato	plastid	33.03	32.72
Solyc05g039950.1.1	Tomato	extracellular	29.79	32.66
Solyc02g081760.1.1	Tomato	plastid	32.79	32.42
Solyc02g081750.1.1	Tomato	plastid	34.18	31.36
VIT_01s0010g02330.t01	Wine grape	cytosol	27.71	30.15
Solyc11g069680.1.1	Tomato	nucleus	31.87	29.11
Solyc01g008300.1.1	Tomato	cytosol	18.01	28.47
Solyc05g014330.1.1	Tomato	extracellular	27.94	28.07
KRH58729	Soybean	plastid, vacuole	24.25	28.0
KRH42621	Soybean	cytosol, golgi, plastid	28.87	26.21
Solyc05g050760.1.1	Tomato	cytosol	9.47	25.47
Solyc06g051320.2.1	Tomato	cytosol, plastid	25.4	25.06
Solyc01g105580.1.1	Tomato	cytosol	25.4	25.0
Solyc12g096770.1.1	Tomato	cytosol	25.4	24.94
Solyc01g105590.2.1	Tomato	cytosol	25.87	24.78
Solyc01g105550.1.1	Tomato	cytosol	25.64	24.56
Solyc07g008380.1.1	Tomato	cytosol	24.94	24.27
Solyc12g096800.1.1	Tomato	cytosol	25.4	23.97
Solyc04g082350.1.1	Tomato	mitochondrion	25.64	23.82
Solyc07g052060.2.1	Tomato	cytosol	14.78	23.7
Solyc12g005440.1.1	Tomato	cytosol, golgi, peroxisome	24.02	23.69
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	24.71	23.57
Solyc12g096790.1.1	Tomato	cytosol	24.25	23.44
Solyc07g006680.1.1	Tomato	cytosol	24.02	23.01
Solyc07g006670.1.1	Tomato	cytosol	24.25	22.78
Solyc12g005430.1.1	Tomato	cytosol, nucleus, peroxisome	24.02	22.76
Solyc02g081770.1.1	Tomato	cytosol	23.33	22.7
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	24.25	22.39
Solyc12g010980.1.1	Tomato	cytosol	22.63	22.02
Solyc06g071940.1.1	Tomato	cytosol	8.55	20.79

Protein Annotations

EnsemblPlants:Solyc11g067340.1.1	EnsemblPlantsGene:Solyc11g067340.1	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	ncoils:Coil	PANTHER:PTHR31623
PANTHER:PTHR31623:SF6	PFAM:PF02458	SEG:seg	UniParc:UPI000276A47C	UniProt:K4D9Z1	MapMan:50.2.3

Description

No Description!

Coordinates

chr11:+:53070123..53071424

Molecular Weight (calculated)

48399.2 Da

IEP (calculated)

6.778

GRAVY (calculated)

-0.159

Length

433 amino acids

Sequence
(BLAST)

001: MASSTILSRK IITPSPPTPS SHRHCNLSFR DQTANTLYLP IAALYSKPEN HTITQISNIL ENSLSKILYF YYPFGGRIKD NKYVDCNDIG AEYFNVHINC
101: QMSEILSNPY NDAIEIVFPQ NMAWGNSLSE ERSSLLVVQL SHFDCGGVGI SICLSHKVAD GYSAFKFLGD WISMARDDHK LNFQPSPQFD GALFLPPIDN
201: PPPMPNVVPD PQQCVSRMYN LSSSTLSKLK DSIVSTNPQI QNPSRIEVAM ALIHKCGVDV SMSKSGVFRP TMLYQVMNLR PPIPLNTMGN ATCLFSTIAM
301: SIDKTTLPSY VGELQKAKQQ LRHKLKQMDT NQLASHAIEK LKEIVNIANE DVFDIYFCTS LCTFGSHKID FGWGSPLRVT QVKHPTKNKF MFLDDPSGEG
401: INVLITLTEA DMLLFQNNKE LLEFASPVVQ SLE

Best Arabidopsis Sequence Match ( AT1G24420.1 )
(BLAST)

001: MEKNVEILSR EIVKPSSPTP DDKRILNLSL LDILSSPMYT GALLFYAADP QNLLGFSTEE TSLKLKKSLS KTLPIFYPLA GRIIGSFVEC NDEGAVFIEA
101: RVDHLLSEFL KCPVPESLEL LIPVEAKSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAESSRGLG ITLIPSFTAS EVFPKPLDEL
201: PSKPMDRKEE VEEMSCVTKR FVFDASKIKK LRAKASRNLV KNPTRVEAVT ALFWRCVTKV SRLSSLTPRT SVLQILVNLR GKVDSLCENT IGNMLSLMIL
301: KNEEAAIERI QDVVDEIRRA KEIFSLNCKE MSKSSSRIFE LLEEIGKVYG RGNEMDLWMS NSWCKLGLYD ADFGWGKPVW VTGRGTSHFK NLMLLIDTKD
401: GEGIEAWITL TEEQMSLFEC DQELLESASL NPPVLI

Arabidopsis Description

F21J9.8 [Source:UniProtKB/TrEMBL;Acc:Q9FYM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.