Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- peroxisome 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020175 | Potato | cytosol, golgi, plastid | 83.37 | 83.18 |
| PGSC0003DMT400020180 | Potato | cytosol, golgi, peroxisome | 81.35 | 82.27 |
| Solyc12g096790.1.1 | Tomato | cytosol | 52.58 | 52.23 |
| Solyc12g096770.1.1 | Tomato | cytosol | 51.69 | 52.15 |
| Solyc07g052060.2.1 | Tomato | cytosol | 29.44 | 48.52 |
| Solyc12g096800.1.1 | Tomato | cytosol | 48.54 | 47.06 |
| Solyc02g081770.1.1 | Tomato | cytosol | 44.94 | 44.94 |
| Solyc12g005430.1.1 | Tomato | cytosol, nucleus, peroxisome | 45.84 | 44.64 |
| Solyc07g008380.1.1 | Tomato | cytosol | 43.82 | 43.82 |
| Solyc12g005440.1.1 | Tomato | cytosol, golgi, peroxisome | 42.25 | 42.82 |
| Solyc07g008390.1.1 | Tomato | extracellular, mitochondrion | 43.82 | 41.58 |
| Solyc12g088170.1.1 | Tomato | cytosol, peroxisome, plastid | 36.18 | 35.46 |
| Solyc05g014330.1.1 | Tomato | extracellular | 28.31 | 29.23 |
| Solyc04g009680.1.1 | Tomato | cytosol, mitochondrion | 14.38 | 29.09 |
| Solyc01g105550.1.1 | Tomato | cytosol | 28.99 | 28.54 |
| Solyc01g105580.1.1 | Tomato | cytosol | 28.09 | 28.41 |
| Solyc04g082350.1.1 | Tomato | mitochondrion | 28.31 | 27.04 |
| Solyc10g079570.1.1 | Tomato | cytosol | 20.0 | 26.65 |
| Solyc01g105590.2.1 | Tomato | cytosol | 26.29 | 25.89 |
| Solyc08g075200.1.1 | Tomato | plastid | 7.19 | 25.6 |
| Solyc01g008300.1.1 | Tomato | cytosol | 15.73 | 25.55 |
| Solyc11g067290.1.1 | Tomato | plastid | 24.49 | 25.53 |
| Solyc06g051320.2.1 | Tomato | cytosol, plastid | 25.17 | 25.51 |
| Solyc02g081800.1.1 | Tomato | cytosol, plastid | 24.27 | 25.06 |
| Solyc07g006680.1.1 | Tomato | cytosol | 25.39 | 25.0 |
| Solyc07g043670.1.1 | Tomato | mitochondrion, plastid | 24.04 | 24.83 |
| Solyc07g043700.1.1 | Tomato | plastid | 23.82 | 24.71 |
| Solyc07g006670.1.1 | Tomato | cytosol | 25.39 | 24.51 |
| Solyc08g014490.1.1 | Tomato | mitochondrion | 23.82 | 24.31 |
| Solyc05g050760.1.1 | Tomato | cytosol | 8.76 | 24.22 |
| Solyc06g071940.1.1 | Tomato | cytosol | 9.66 | 24.16 |
| Solyc02g081740.1.1 | Tomato | plastid | 23.6 | 24.03 |
| Solyc11g067270.1.1 | Tomato | mitochondrion | 23.15 | 23.95 |
| Solyc02g081760.1.1 | Tomato | plastid | 23.15 | 23.52 |
| Solyc11g067330.1.1 | Tomato | plastid | 22.7 | 23.33 |
| Solyc12g006330.1.1 | Tomato | mitochondrion, plastid | 22.25 | 23.24 |
| Solyc07g043710.2.1 | Tomato | plastid | 22.25 | 22.71 |
| Solyc02g081750.1.1 | Tomato | plastid | 24.04 | 22.67 |
| Solyc04g012020.1.1 | Tomato | mitochondrion, plastid | 22.7 | 22.65 |
| Solyc11g067340.1.1 | Tomato | plastid | 22.02 | 22.63 |
| Solyc08g075210.1.1 | Tomato | plastid | 21.12 | 22.17 |
| Solyc05g039950.1.1 | Tomato | extracellular | 19.1 | 21.52 |
| Solyc11g069680.1.1 | Tomato | nucleus | 21.8 | 20.46 |
| Solyc08g075180.1.1 | Tomato | cytosol | 9.89 | 16.73 |
| Solyc11g067350.1.1 | Tomato | plastid | 6.97 | 16.32 |
Protein Annotations
| EnsemblPlants:Solyc12g010980.1.1 | EnsemblPlantsGene:Solyc12g010980.1 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31623 | PANTHER:PTHR31623:SF16 |
| PFAM:PF02458 | SEG:seg | UniParc:UPI0002769FFD | UniProt:K4DCI4 | MapMan:50.2.3 | : |
Description
No Description!
Coordinates
chr12:-:3842393..3843730
Molecular Weight (calculated)
50662.4 Da
IEP (calculated)
6.450
GRAVY (calculated)
-0.154
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDSMQVTIL SKNLIKPSLP TPKHLKYHKL SFFDQVADVA HLPLVLFYPH CKNNSKHEEL EESLSRILSH VYPLAGRFAE DDESLILCLD QGVTYIKAKV
101: NCTLDDLLQQ TKKDLDLALS FWPQGTMDVD DSNLFVTPLM VVQVTTFECG GLALAISIAH PVMDGCTTFK ILYEWTKVCK FGTPSKEISF MNFNVGALFP
201: YKHDLSTLLE PPVDEGKRKD SKLIARKFVF EKDAISRLRE KFDSISESLG FKPSRVEMIT ALLWRSLIRS TKSAKLKRSV MSFPLNLRGK VADFPEITDS
301: FGNLIIEVPI KFEHDDETKI ESLHQIVKLI KESVKVINNK CVKATPDEII SLVIDLYKDS YSGLEWGGDD EVMNFTSSSL SRFPIQKTDF GWGKPSLMHF
401: GSRHNQVLWL YDTECETGIV VQMDLEKKHM DKLVCDQDII DFAKF
101: NCTLDDLLQQ TKKDLDLALS FWPQGTMDVD DSNLFVTPLM VVQVTTFECG GLALAISIAH PVMDGCTTFK ILYEWTKVCK FGTPSKEISF MNFNVGALFP
201: YKHDLSTLLE PPVDEGKRKD SKLIARKFVF EKDAISRLRE KFDSISESLG FKPSRVEMIT ALLWRSLIRS TKSAKLKRSV MSFPLNLRGK VADFPEITDS
301: FGNLIIEVPI KFEHDDETKI ESLHQIVKLI KESVKVINNK CVKATPDEII SLVIDLYKDS YSGLEWGGDD EVMNFTSSSL SRFPIQKTDF GWGKPSLMHF
401: GSRHNQVLWL YDTECETGIV VQMDLEKKHM DKLVCDQDII DFAKF
001: MGLEITVTSQ ELVKPSPRNL NHPPCHHHLS FLDQLAPPIF MPFLFFYHNK TNLSDKERSD HIKSSLSEIL NLYYPLAGRI KNSGDVVVCN DVGVSFVEAK
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS
Arabidopsis Description
F21J9.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.