Factsheet for Solyc12g005440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

plastid 2
peroxisome 2
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046322	Potato	cytosol	36.22	87.85
PGSC0003DMT400036383	Potato	cytosol, extracellular, peroxisome	87.7	86.71
PGSC0003DMT400036374	Potato	golgi, nucleus, peroxisome	87.02	86.04
PGSC0003DMT400036377	Potato	cytosol	61.5	85.44
Solyc07g052060.2.1	Tomato	cytosol	42.14	68.52
Solyc02g081770.1.1	Tomato	cytosol	67.43	66.52
Solyc12g005430.1.1	Tomato	cytosol, nucleus, peroxisome	65.38	62.8
Solyc12g096770.1.1	Tomato	cytosol	50.8	50.57
Solyc12g096790.1.1	Tomato	cytosol	49.89	48.88
Solyc12g096800.1.1	Tomato	cytosol	47.84	45.75
Solyc12g010980.1.1	Tomato	cytosol	42.82	42.25
Solyc07g008380.1.1	Tomato	cytosol	41.69	41.12
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	41.23	38.59
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	36.22	35.02
Solyc01g105580.1.1	Tomato	cytosol	27.79	27.73
Solyc01g105550.1.1	Tomato	cytosol	28.47	27.65
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	13.67	27.27
Solyc01g105590.2.1	Tomato	cytosol	27.79	26.99
Solyc05g050760.1.1	Tomato	cytosol	9.57	26.09
Solyc05g014330.1.1	Tomato	extracellular	25.51	25.99
Solyc08g014490.1.1	Tomato	mitochondrion	25.51	25.69
Solyc08g075200.1.1	Tomato	plastid	7.06	24.8
Solyc11g067290.1.1	Tomato	plastid	23.92	24.59
Solyc02g081740.1.1	Tomato	plastid	24.37	24.49
Solyc07g043700.1.1	Tomato	plastid	23.92	24.48
Solyc10g079570.1.1	Tomato	cytosol	18.45	24.25
Solyc11g067340.1.1	Tomato	plastid	23.69	24.02
Solyc11g067330.1.1	Tomato	plastid	23.69	24.02
Solyc02g081760.1.1	Tomato	plastid	23.92	23.97
Solyc06g051320.2.1	Tomato	cytosol, plastid	23.92	23.92
Solyc07g006680.1.1	Tomato	cytosol	24.6	23.89
Solyc07g043710.2.1	Tomato	plastid	23.69	23.85
Solyc07g006670.1.1	Tomato	cytosol	24.83	23.64
Solyc02g081800.1.1	Tomato	cytosol, plastid	23.01	23.43
Solyc01g008300.1.1	Tomato	cytosol	14.58	23.36
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	23.69	23.32
Solyc02g081750.1.1	Tomato	plastid	25.06	23.31
Solyc04g082350.1.1	Tomato	mitochondrion	23.92	22.53
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	22.1	22.51
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	21.64	22.3
Solyc11g067270.1.1	Tomato	mitochondrion	21.64	22.09
Solyc08g075210.1.1	Tomato	plastid	20.96	21.7
Solyc06g071940.1.1	Tomato	cytosol	8.43	20.79
Solyc11g067350.1.1	Tomato	plastid	8.88	20.53
Solyc05g039950.1.1	Tomato	extracellular	18.22	20.25
Solyc08g075180.1.1	Tomato	cytosol	12.07	20.15
Solyc11g069680.1.1	Tomato	nucleus	20.05	18.57

Protein Annotations

EnsemblPlants:Solyc12g005440.1.1	EnsemblPlantsGene:Solyc12g005440.1	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623	PANTHER:PTHR31623:SF16
PFAM:PF02458	UniParc:UPI000276A2FC	UniProt:K4DB82	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr12:-:262396..263715

Molecular Weight (calculated)

50225.1 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.065

Length

439 amino acids

Sequence
(BLAST)

001: MEIKILCTKL IKPFLPTPPH LQHYKLSFFD QISEKEHVSM VFFFHNYNNI DMDERLEQSL SKILTHVYPA GGRYNEKDKY CSILCVDQGV FYTKAKTNGT
101: LDNFLNKARN DLGHAALFSP HVNKNIDETN FMVSPIVTIQ VTEFECGGVA ISISTSHPAM DGFSDFQFIS EWAKVCRIGT PIDKINILSF NMGDIFPTRD
201: ITGIFKSTPT PIIQQDIVVK RIVIHEDVMS RLRKKCTFST FQPSRVEIIT AILWRAFIRA TAIINGYLRP SLLDFPMNMR SKITFLPQVK NSYGNFMIGV
301: PVKFIPGENK MELHDFIMLI RNAVNKIVAS CKKANSPDEI VATLVDSYNV SFRSPEWGGN DEVDKVMCTS ICKFPVHDSD FGLGKPNLIF FGMKDTQMFW
401: LYDIGPEIVV QVDLKERCMQ LFDREDDIKD LIFIRDAKL

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.