Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075234 | Potato | cytosol | 34.24 | 92.64 |
| Solyc12g096790.1.1 | Tomato | cytosol | 90.7 | 89.29 |
| PGSC0003DMT400075231 | Potato | cytosol | 32.2 | 81.14 |
| PGSC0003DMT400075229 | Potato | cytosol | 18.59 | 55.03 |
| Solyc12g096800.1.1 | Tomato | cytosol | 54.2 | 52.07 |
| Solyc12g010980.1.1 | Tomato | cytosol | 52.15 | 51.69 |
| Solyc02g081770.1.1 | Tomato | cytosol | 51.47 | 51.01 |
| Solyc12g005440.1.1 | Tomato | cytosol, golgi, peroxisome | 50.57 | 50.8 |
| Solyc07g052060.2.1 | Tomato | cytosol | 30.61 | 50.0 |
| Solyc12g005430.1.1 | Tomato | cytosol, nucleus, peroxisome | 51.02 | 49.23 |
| Solyc07g008380.1.1 | Tomato | cytosol | 44.9 | 44.49 |
| Solyc07g008390.1.1 | Tomato | extracellular, mitochondrion | 45.12 | 42.43 |
| Solyc12g088170.1.1 | Tomato | cytosol, peroxisome, plastid | 40.36 | 39.21 |
| Solyc04g009680.1.1 | Tomato | cytosol, mitochondrion | 16.33 | 32.73 |
| Solyc01g105550.1.1 | Tomato | cytosol | 30.16 | 29.42 |
| Solyc05g014330.1.1 | Tomato | extracellular | 28.12 | 28.77 |
| Solyc01g105580.1.1 | Tomato | cytosol | 28.57 | 28.64 |
| Solyc07g043700.1.1 | Tomato | plastid | 26.3 | 27.04 |
| Solyc01g008300.1.1 | Tomato | cytosol | 16.78 | 27.01 |
| Solyc01g105590.2.1 | Tomato | cytosol | 27.21 | 26.55 |
| Solyc10g079570.1.1 | Tomato | cytosol | 19.95 | 26.35 |
| Solyc08g014490.1.1 | Tomato | mitochondrion | 25.85 | 26.15 |
| Solyc07g006680.1.1 | Tomato | cytosol | 26.76 | 26.11 |
| Solyc04g012020.1.1 | Tomato | mitochondrion, plastid | 26.3 | 26.01 |
| Solyc11g067330.1.1 | Tomato | plastid | 25.4 | 25.87 |
| Solyc02g081740.1.1 | Tomato | plastid | 25.4 | 25.63 |
| Solyc08g075200.1.1 | Tomato | plastid | 7.26 | 25.6 |
| Solyc07g006670.1.1 | Tomato | cytosol | 26.76 | 25.6 |
| Solyc11g067340.1.1 | Tomato | plastid | 24.94 | 25.4 |
| Solyc11g067290.1.1 | Tomato | plastid | 24.49 | 25.29 |
| Solyc06g051320.2.1 | Tomato | cytosol, plastid | 25.17 | 25.28 |
| Solyc06g071940.1.1 | Tomato | cytosol | 10.2 | 25.28 |
| Solyc02g081760.1.1 | Tomato | plastid | 24.72 | 24.89 |
| Solyc05g050760.1.1 | Tomato | cytosol | 9.07 | 24.84 |
| Solyc02g081800.1.1 | Tomato | cytosol, plastid | 24.26 | 24.83 |
| Solyc07g043710.2.1 | Tomato | plastid | 24.49 | 24.77 |
| Solyc04g082350.1.1 | Tomato | mitochondrion | 25.85 | 24.46 |
| Solyc07g043670.1.1 | Tomato | mitochondrion, plastid | 23.36 | 23.9 |
| Solyc02g081750.1.1 | Tomato | plastid | 25.4 | 23.73 |
| Solyc11g067270.1.1 | Tomato | mitochondrion | 23.13 | 23.72 |
| Solyc05g039950.1.1 | Tomato | extracellular | 20.63 | 23.04 |
| Solyc08g075210.1.1 | Tomato | plastid | 22.0 | 22.88 |
| Solyc11g069680.1.1 | Tomato | nucleus | 23.58 | 21.94 |
| Solyc12g006330.1.1 | Tomato | mitochondrion, plastid | 20.86 | 21.6 |
| Solyc11g067350.1.1 | Tomato | plastid | 8.84 | 20.53 |
| Solyc08g075180.1.1 | Tomato | cytosol | 12.02 | 20.15 |
Protein Annotations
| EnsemblPlants:Solyc12g096770.1.1 | EnsemblPlantsGene:Solyc12g096770.1 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31623 | PANTHER:PTHR31623:SF16 |
| PFAM:PF02458 | UniParc:UPI0002769EC0 | UniProt:K4DHF0 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr12:+:65547985..65549310
Molecular Weight (calculated)
50766.1 Da
IEP (calculated)
6.026
GRAVY (calculated)
-0.228
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIEIISTKF IKPSSPTPNH LQTYKLSFFD QVSDETHLPL VFFYPPTNNI NFSSHHEEQL EQSLSRILTH VYPISGRFNE DINSISCQDQ GVKFIKAKMN
101: SKLNEFLDKA HKDVNLSLLC WPQDSWNVDP SNLFTMPLVI IQITEFECGG LALSMSHMHM TMDGYSTFSF INEWSKVCRH KIPLEKIDFM SFDLANVFPT
201: RDLSKLLLPR IPPVDRVECK LVARRLYINE DSISRLREKV SGDLCKFKPS RVEMIMAILW RAVIRASEKK HGYLRRSLMN IPINLRTRLI SLPQVEKSFG
301: NLGVDAPIKF IPEENKMELH EFVTLIHNAV KETITTCDKT SPEDIVSAVS NIYNESFLAQ DWGGNDEVDR IISSSLCKFP IQEADFGWGK PCLMHFGSRH
401: GQVCWLYDAE CGNGICVQVD LKEDNMNLFE CDNDIKDFFQ F
101: SKLNEFLDKA HKDVNLSLLC WPQDSWNVDP SNLFTMPLVI IQITEFECGG LALSMSHMHM TMDGYSTFSF INEWSKVCRH KIPLEKIDFM SFDLANVFPT
201: RDLSKLLLPR IPPVDRVECK LVARRLYINE DSISRLREKV SGDLCKFKPS RVEMIMAILW RAVIRASEKK HGYLRRSLMN IPINLRTRLI SLPQVEKSFG
301: NLGVDAPIKF IPEENKMELH EFVTLIHNAV KETITTCDKT SPEDIVSAVS NIYNESFLAQ DWGGNDEVDR IISSSLCKFP IQEADFGWGK PCLMHFGSRH
401: GQVCWLYDAE CGNGICVQVD LKEDNMNLFE CDNDIKDFFQ F
001: MEKNVEILSR EIVKPSSPTP DDKRILNLSL LDILSSPMYT GALLFYAADP QNLLGFSTEE TSLKLKKSLS KTLPIFYPLA GRIIGSFVEC NDEGAVFIEA
101: RVDHLLSEFL KCPVPESLEL LIPVEAKSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAESSRGLG ITLIPSFTAS EVFPKPLDEL
201: PSKPMDRKEE VEEMSCVTKR FVFDASKIKK LRAKASRNLV KNPTRVEAVT ALFWRCVTKV SRLSSLTPRT SVLQILVNLR GKVDSLCENT IGNMLSLMIL
301: KNEEAAIERI QDVVDEIRRA KEIFSLNCKE MSKSSSRIFE LLEEIGKVYG RGNEMDLWMS NSWCKLGLYD ADFGWGKPVW VTGRGTSHFK NLMLLIDTKD
401: GEGIEAWITL TEEQMSLFEC DQELLESASL NPPVLI
101: RVDHLLSEFL KCPVPESLEL LIPVEAKSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAESSRGLG ITLIPSFTAS EVFPKPLDEL
201: PSKPMDRKEE VEEMSCVTKR FVFDASKIKK LRAKASRNLV KNPTRVEAVT ALFWRCVTKV SRLSSLTPRT SVLQILVNLR GKVDSLCENT IGNMLSLMIL
301: KNEEAAIERI QDVVDEIRRA KEIFSLNCKE MSKSSSRIFE LLEEIGKVYG RGNEMDLWMS NSWCKLGLYD ADFGWGKPVW VTGRGTSHFK NLMLLIDTKD
401: GEGIEAWITL TEEQMSLFEC DQELLESASL NPPVLI
Arabidopsis Description
F21J9.8 [Source:UniProtKB/TrEMBL;Acc:Q9FYM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.