Factsheet for Solyc01g105550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032643	Potato	extracellular	75.89	76.56
PGSC0003DMT400032639	Potato	cytosol	69.25	76.53
PGSC0003DMT400026730	Potato	plastid	67.48	74.39
PGSC0003DMT400062415	Potato	cytosol	64.6	74.3
Solyc01g105580.1.1	Tomato	cytosol	70.58	72.5
Solyc01g105590.2.1	Tomato	cytosol	69.25	69.25
VIT_09s0096g00880.t01	Wine grape	mitochondrion	14.82	38.95
VIT_00s0606g00010.t01	Wine grape	plastid	15.71	35.68
VIT_03s0038g01330.t01	Wine grape	plastid	30.53	32.17
VIT_03s0017g00870.t01	Wine grape	plastid	30.31	32.08
Solyc12g088170.1.1	Tomato	cytosol, peroxisome, plastid	30.53	30.4
Solyc12g096770.1.1	Tomato	cytosol	29.42	30.16
Solyc12g096800.1.1	Tomato	cytosol	30.53	30.07
Solyc05g014330.1.1	Tomato	extracellular	27.88	29.23
Solyc12g005430.1.1	Tomato	cytosol, nucleus, peroxisome	29.42	29.1
Solyc12g010980.1.1	Tomato	cytosol	28.54	28.99
Solyc07g052060.2.1	Tomato	cytosol	17.26	28.89
Solyc12g096790.1.1	Tomato	cytosol	28.32	28.57
Solyc04g082350.1.1	Tomato	mitochondrion	29.42	28.54
Solyc07g008380.1.1	Tomato	cytosol	28.1	28.54
Solyc12g005440.1.1	Tomato	cytosol, golgi, peroxisome	27.65	28.47
Solyc02g081770.1.1	Tomato	cytosol	26.99	27.42
Solyc05g050760.1.1	Tomato	cytosol	9.73	27.33
Solyc04g009680.1.1	Tomato	cytosol, mitochondrion	13.27	27.27
Solyc08g075200.1.1	Tomato	plastid	7.52	27.2
Solyc06g051320.2.1	Tomato	cytosol, plastid	26.33	27.11
Solyc07g008390.1.1	Tomato	extracellular, mitochondrion	28.1	27.08
Solyc01g008300.1.1	Tomato	cytosol	16.37	27.01
Solyc10g079570.1.1	Tomato	cytosol	19.91	26.95
Solyc07g043700.1.1	Tomato	plastid	25.44	26.81
Solyc06g071940.1.1	Tomato	cytosol	10.4	26.4
Solyc04g012020.1.1	Tomato	mitochondrion, plastid	25.89	26.23
Solyc11g067290.1.1	Tomato	plastid	24.78	26.23
Solyc08g014490.1.1	Tomato	mitochondrion	25.0	25.92
Solyc02g081760.1.1	Tomato	plastid	25.0	25.8
Solyc02g081800.1.1	Tomato	cytosol, plastid	24.56	25.75
Solyc11g067340.1.1	Tomato	plastid	24.56	25.64
Solyc02g081740.1.1	Tomato	plastid	24.78	25.63
Solyc11g067330.1.1	Tomato	plastid	24.34	25.4
Solyc07g043670.1.1	Tomato	mitochondrion, plastid	24.11	25.29
Solyc08g075210.1.1	Tomato	plastid	23.67	25.24
Solyc07g006680.1.1	Tomato	cytosol	24.78	24.78
Solyc07g006670.1.1	Tomato	cytosol	25.22	24.73
Solyc11g067270.1.1	Tomato	mitochondrion	23.45	24.65
Solyc07g043710.2.1	Tomato	plastid	23.67	24.54
Solyc02g081750.1.1	Tomato	plastid	25.44	24.36
Solyc05g039950.1.1	Tomato	extracellular	20.58	23.54
Solyc08g075180.1.1	Tomato	cytosol	13.27	22.81
Solyc12g006330.1.1	Tomato	mitochondrion, plastid	21.24	22.54
Solyc11g069680.1.1	Tomato	nucleus	21.46	20.46
Solyc11g067350.1.1	Tomato	plastid	7.52	17.89

Protein Annotations

EMBL:JQ899257	EnsemblPlants:Solyc01g105550.1.1	EnsemblPlantsGene:Solyc01g105550.1	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF16	PFAM:PF02458	SEG:seg	UniParc:UPI000269AFFC	UniProt:I6TSB7	MapMan:50.2.3

Description

AT1 [Source:UniProtKB/TrEMBL;Acc:I6TSB7]

Coordinates

chr1:+:93688741..93690099

Molecular Weight (calculated)

50258.1 Da

IEP (calculated)

6.120

GRAVY (calculated)

-0.202

Length

452 amino acids

Sequence
(BLAST)

001: MACRLDIEIQ SRKLLKPSAS TPDNLRRLKL SLFDQLALRT YIPVLFNYLP SSSSTSYDDE LEKSLAETLT KFYPFAGRFA KDIDPFSIDC NDEGVEYVQT
101: KVNADDLAQF LRGQAHNDSE SSLIDLLPIK DVEPSSPSSP LFGVQVNVFN NGGVTIGIQI SHIVADAFTM ATFVNEWAHT CLTGRTVSNN PGFGQLSLLF
201: PAKVLQFPSP SPDLNTNTTT TGPNYKIVTR RFVFDALAIE NLRKTIKDND MMMKQPSRVV VIMSLMWKVL THISSAKNNG NSRDSSLGFP INMRGKLSCT
301: APSLEHALGN YGMMGIADRK ARRKDDELND FVKLVGNTIW NTCEAIGKAE SVDDISSLAF NNHIKGVEKL LQEDKMDVYG TTSWCKLPWY EADFGWGKPF
401: WVSPVGLNLI EGAILMDTKD GNGVQLTICL KEKNMTEFEK HLHIFSSTPI LG

Best Arabidopsis Sequence Match ( AT5G47950.1 )
(BLAST)

001: MDTMKVETIG KEIIKPSATT PTDLSTLQLS IMDILMPPVY AVAFLFYTKD DLISQEQTSH TLKTSLSEIL TKFHPLAGRV NGVTIKSTDE GAVFVEARVD
101: NCDLSGFLRS PDTESLKQLL PVDDEPAPTW PLLLVKATYF RCGGMAIGLC ISHRLADAAS LSIFLQAWAA TARGESDLVA SPDFCSTKLY PAANEAIKIP
201: GEVVNRTSVT KRFVFVASKI EELRNKVASD VVPRPTRVQS VTSLIWKCVV TASTDTIREK ALFQPANLRT KIPSLLSENQ IGNLLFNSLI LDGKAGMDIV
301: ETVKELQKRA EDLSGLVQDE EGSSMTIGWR LFGEIINSKF NREDHDMHSV TSWCKIPLYD ACFGWGSPVW VAGSVSPNLD YVTVLIDSKD GQGIEAWVTL
401: PQENMLLLEQ STELLAFASP NPSVLI

Arabidopsis Description

Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGV4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.