Factsheet for VIT_00s0606g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0096g00880.t01	Wine grape	mitochondrion	85.43	98.84
VIT_03s0038g01330.t01	Wine grape	plastid	79.4	36.83
PGSC0003DMT400097407	Potato	cytosol	23.12	35.11
VIT_03s0017g00870.t01	Wine grape	plastid	58.29	27.17
VIT_01s0010g02340.t01	Wine grape	cytosol, plasma membrane, plastid	24.12	26.37
Solyc01g105550.1.1	Tomato	cytosol	35.68	15.71
VIT_01s0010g02320.t01	Wine grape	cytosol, peroxisome, plasma membrane	33.67	15.55
VIT_18s0001g00450.t01	Wine grape	cytosol	34.17	15.28
Solyc01g105590.2.1	Tomato	cytosol	33.67	14.82
PGSC0003DMT400032641	Potato	mitochondrion	32.66	14.81
PGSC0003DMT400032643	Potato	extracellular	33.17	14.73
PGSC0003DMT400032637	Potato	cytosol, golgi, mitochondrion, plastid	29.65	14.36
PGSC0003DMT400032651	Potato	cytosol	30.65	13.99
PGSC0003DMT400086558	Potato	plastid	29.15	13.78
PGSC0003DMT400032639	Potato	cytosol	27.64	13.45
Solyc01g105580.1.1	Tomato	cytosol	29.65	13.41
VIT_01s0010g02300.t01	Wine grape	cytosol	17.59	13.06
PGSC0003DMT400026730	Potato	plastid	26.13	12.68
VIT_01s0010g02330.t01	Wine grape	cytosol	23.12	11.56
PGSC0003DMT400062415	Potato	cytosol	21.61	10.94

Protein Annotations

ArrayExpress:VIT_00s0606g00010	EMBL:FN596539	EnsemblPlants:VIT_00s0606g00010.t01	EnsemblPlantsGene:VIT_00s0606g00010	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31623	PANTHER:PTHR31623:SF17	PFAM:PF02458	ProteinID:CCB61075	ProteinID:CCB61075.1	SEG:seg
UniParc:UPI000210AABE	UniProt:F6I2A8	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chrUn:-:32774549..32775563

Molecular Weight (calculated)

22024.2 Da

IEP (calculated)

8.987

GRAVY (calculated)

-0.193

Length

199 amino acids

Sequence
(BLAST)

001: MAEKYSSVKY HSSLTFFSPQ KATIEVEMLS TKLIKPSSPT RSHLRTLKLS PIDQLFTYTV KPSAICYYSA DSSNSSRSED VGRRNRLETS LSETLTRFYP
101: LAGGYIKDSH SVDCNDEGVE YLEAKVEGQL SQLLSRRDEM IYQLVRLSGG ESTSPVASIQ IGVRIHHIVV DGFTAASFVS AWATASRVGI GKLIFRLSA

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.