Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0096g00880.t01 | Wine grape | mitochondrion | 25.27 | 26.74 |
| VIT_00s0606g00010.t01 | Wine grape | plastid | 26.37 | 24.12 |
| VIT_01s0010g02330.t01 | Wine grape | cytosol | 33.52 | 15.33 |
| VIT_18s0001g00450.t01 | Wine grape | cytosol | 36.81 | 15.06 |
| VIT_01s0010g02320.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 33.52 | 14.15 |
| KRH58729 | Soybean | plastid, vacuole | 28.57 | 13.87 |
| KRH42621 | Soybean | cytosol, golgi, plastid | 35.71 | 13.63 |
| VIT_03s0038g01330.t01 | Wine grape | plastid | 31.32 | 13.29 |
| VIT_03s0017g00870.t01 | Wine grape | plastid | 29.12 | 12.41 |
| VIT_01s0010g02300.t01 | Wine grape | cytosol | 15.38 | 10.45 |
Protein Annotations
| ArrayExpress:VIT_01s0010g02340 | EMBL:FN595754 | EnsemblPlants:VIT_01s0010g02340.t01 | EnsemblPlantsGene:VIT_01s0010g02340 | Gene3D:3.30.559.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase |
| PANTHER:PTHR31623 | PANTHER:PTHR31623:SF15 | PFAM:PF02458 | ProteinID:CBI27538 | ProteinID:CBI27538.3 | TMHMM:TMhelix |
| UniParc:UPI0001BE2AF6 | UniProt:D7TAL5 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1:+:19370001..19372078
Molecular Weight (calculated)
20439.9 Da
IEP (calculated)
6.781
GRAVY (calculated)
0.056
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPEIISRQT IKPSSPTPDS KKIYKLSLLD LLIANRIYVP IIFFYQNKEG DNSVDVAHIS SGLKKSLSET LTHYYPLAGR IKDGVTVECN DEGAYFSEAR
101: IDCHLEGFLK HPEARDYLDL LMPVEIQSNS SDMGSLLLIQ ITFFSSASPV CIFAPTILHM TQTLVQLAYI CLFKLITQKH GL
101: IDCHLEGFLK HPEARDYLDL LMPVEIQSNS SDMGSLLLIQ ITFFSSASPV CIFAPTILHM TQTLVQLAYI CLFKLITQKH GL
001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL
Arabidopsis Description
HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.