Factsheet for VIT_09s0096g00880.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0606g00010.t01	Wine grape	plastid	98.84	85.43
VIT_03s0038g01330.t01	Wine grape	plastid	90.7	36.36
PGSC0003DMT400097407	Potato	cytosol	24.42	32.06
VIT_03s0017g00870.t01	Wine grape	plastid	65.7	26.46
VIT_01s0010g02340.t01	Wine grape	cytosol, plasma membrane, plastid	26.74	25.27
Solyc01g105550.1.1	Tomato	cytosol	38.95	14.82
VIT_18s0001g00450.t01	Wine grape	cytosol	37.79	14.61
PGSC0003DMT400032637	Potato	cytosol, golgi, mitochondrion, plastid	33.72	14.11
Solyc01g105590.2.1	Tomato	cytosol	36.63	13.94
VIT_01s0010g02320.t01	Wine grape	cytosol, peroxisome, plasma membrane	34.88	13.92
PGSC0003DMT400032641	Potato	mitochondrion	35.47	13.9
PGSC0003DMT400032643	Potato	extracellular	36.05	13.84
PGSC0003DMT400086558	Potato	plastid	33.14	13.54
Solyc01g105580.1.1	Tomato	cytosol	33.72	13.18
VIT_01s0010g02300.t01	Wine grape	cytosol	19.77	12.69
PGSC0003DMT400026730	Potato	plastid	30.23	12.68
PGSC0003DMT400032651	Potato	cytosol	31.98	12.61
PGSC0003DMT400032639	Potato	cytosol	29.65	12.47
VIT_01s0010g02330.t01	Wine grape	cytosol	26.16	11.31
PGSC0003DMT400062415	Potato	cytosol	25.0	10.94

Protein Annotations

ArrayExpress:VIT_09s0096g00880	EMBL:FN596243	EnsemblPlants:VIT_09s0096g00880.t01	EnsemblPlantsGene:VIT_09s0096g00880	EntrezGene:104880349	Gene3D:3.30.559.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213
InterPro:Transferase	PANTHER:PTHR31623	PANTHER:PTHR31623:SF17	PFAM:PF02458	ProteinID:CCB57579	ProteinID:CCB57579.1
RefSeq:XP_010655003.1	SEG:seg	UniParc:UPI0002109697	UniProt:F6HSC0	MapMan:50.2.3	:

Description

No Description!

Coordinates

chr9:+:12592145..12593134

Molecular Weight (calculated)

18951.5 Da

IEP (calculated)

9.055

GRAVY (calculated)

-0.143

Length

172 amino acids

Sequence
(BLAST)

001: MLSTKLIKPS SPTRSHLRTL KLSPIDQLFT YTVKPSAICY YSADSSNSSR SEDVARRNRL ETSLSETLTR FYTLAGGYIK DSHSVDCNDE GVEYLEAKVE
101: GQLSQLLSRR DEMIYQLVRL SGGESTSPVA SIQIGVRIHH IVVDGFTAAS FVSAWATASR VGIGKLIFRL SA

Best Arabidopsis Sequence Match ( AT3G26040.1 )
(BLAST)

001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.