Factsheet for PGSC0003DMT400032641

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400086558	Potato	plastid	63.1	65.8
PGSC0003DMT400032651	Potato	cytosol	64.69	65.14
PGSC0003DMT400032637	Potato	cytosol, golgi, mitochondrion, plastid	60.59	64.72
PGSC0003DMT400097407	Potato	cytosol	17.77	59.54
PGSC0003DMT400032643	Potato	extracellular	54.67	53.57
PGSC0003DMT400062415	Potato	cytosol	46.47	51.91
PGSC0003DMT400032639	Potato	cytosol	48.29	51.83
PGSC0003DMT400026730	Potato	plastid	47.84	51.22
VIT_09s0096g00880.t01	Wine grape	mitochondrion	13.9	35.47
PGSC0003DMT400069354	Potato	cytosol	11.62	34.93
PGSC0003DMT400041528	Potato	cytosol, peroxisome, plastid	35.76	34.58
VIT_03s0038g01330.t01	Wine grape	plastid	33.71	34.5
VIT_03s0017g00870.t01	Wine grape	plastid	33.49	34.43
PGSC0003DMT400075234	Potato	cytosol	12.53	33.74
PGSC0003DMT400044934	Potato	cytosol	32.35	33.02
VIT_00s0606g00010.t01	Wine grape	plastid	14.81	32.66
PGSC0003DMT400095358	Potato	cytosol	14.58	32.16
PGSC0003DMT400094717	Potato	cytosol	9.79	31.85
PGSC0003DMT400042163	Potato	cytosol, mitochondrion	31.66	31.81
PGSC0003DMT400034254	Potato	cytosol	23.92	31.63
PGSC0003DMT400069353	Potato	cytosol	23.01	31.46
PGSC0003DMT400046325	Potato	peroxisome	28.93	31.2
PGSC0003DMT400030107	Potato	cytosol	21.18	30.9
PGSC0003DMT400018478	Potato	cytosol, endoplasmic reticulum, peroxisome	29.84	30.61
PGSC0003DMT400093404	Potato	cytosol	17.08	30.36
PGSC0003DMT400046332	Potato	cytosol	30.75	30.34
PGSC0003DMT400036369	Potato	cytosol	21.87	30.28
PGSC0003DMT400042204	Potato	cytosol	29.84	29.91
PGSC0003DMT400020180	Potato	cytosol, golgi, peroxisome	29.61	29.55
PGSC0003DMT400092870	Potato	cytosol	9.79	29.45
PGSC0003DMT400060400	Potato	plastid	28.93	29.2
PGSC0003DMT400036371	Potato	cytosol	27.56	29.16
PGSC0003DMT400075205	Potato	cytosol	30.07	29.14
PGSC0003DMT400034333	Potato	cytosol	26.42	29.07
PGSC0003DMT400036374	Potato	golgi, nucleus, peroxisome	29.39	29.05
PGSC0003DMT400046420	Potato	cytosol, peroxisome, plastid	29.84	28.92
PGSC0003DMT400060369	Potato	cytosol	29.39	28.86
PGSC0003DMT400036505	Potato	plastid	28.25	28.84
PGSC0003DMT400046322	Potato	cytosol	11.85	28.73
PGSC0003DMT400020175	Potato	cytosol, golgi, plastid	28.93	28.48
PGSC0003DMT400041122	Potato	plastid	28.02	28.47
PGSC0003DMT400065716	Potato	plastid	27.79	28.44
PGSC0003DMT400034258	Potato	extracellular, nucleus, peroxisome, plastid	20.27	28.43
PGSC0003DMT400019092	Potato	mitochondrion, plastid	27.56	28.34
PGSC0003DMT400011357	Potato	cytosol	25.51	28.28
PGSC0003DMT400038710	Potato	plastid	28.25	28.18
PGSC0003DMT400046320	Potato	cytosol	20.27	28.16
PGSC0003DMT400018864	Potato	cytosol, plastid	27.56	28.14
PGSC0003DMT400046421	Potato	cytosol, vacuole	25.74	28.04
PGSC0003DMT400036383	Potato	cytosol, extracellular, peroxisome	28.25	27.93
PGSC0003DMT400034385	Potato	cytosol, mitochondrion, peroxisome, plastid	28.7	27.81
PGSC0003DMT400018015	Potato	cytosol	26.88	27.76
PGSC0003DMT400021066	Potato	mitochondrion	26.88	27.7
PGSC0003DMT400070642	Potato	cytosol	29.39	27.62
PGSC0003DMT400067789	Potato	mitochondrion, plastid	27.11	27.48
PGSC0003DMT400062295	Potato	cytosol	27.33	27.4
PGSC0003DMT400021069	Potato	cytosol	21.64	27.3
PGSC0003DMT400088832	Potato	plastid	26.42	26.54
PGSC0003DMT400093342	Potato	cytosol	21.18	26.2
PGSC0003DMT400018860	Potato	cytosol	20.27	26.1
PGSC0003DMT400096515	Potato	plastid	25.97	26.09
PGSC0003DMT400090681	Potato	cytosol	5.92	26.0
PGSC0003DMT400023800	Potato	cytosol, plastid	23.01	25.83
PGSC0003DMT400064904	Potato	mitochondrion	25.51	25.81
PGSC0003DMT400091982	Potato	cytosol	20.27	25.36
PGSC0003DMT400060660	Potato	cytosol	20.96	25.21
PGSC0003DMT400018854	Potato	plastid	27.56	25.05
PGSC0003DMT400074128	Potato	mitochondrion	23.92	24.82
PGSC0003DMT400094682	Potato	cytosol	6.83	24.79
PGSC0003DMT400070645	Potato	cytosol	22.55	24.57
PGSC0003DMT400036377	Potato	cytosol	17.54	24.37
PGSC0003DMT400075229	Potato	cytosol	8.2	24.16
PGSC0003DMT400075231	Potato	cytosol	9.57	24.0
PGSC0003DMT400067792	Potato	cytosol	18.0	23.87
PGSC0003DMT400075209	Potato	cytosol, plastid, vacuole	12.53	23.81
PGSC0003DMT400086928	Potato	extracellular	8.43	23.57
PGSC0003DMT400050667	Potato	plastid	16.63	23.55
PGSC0003DMT400095666	Potato	mitochondrion	14.12	23.48
PGSC0003DMT400075236	Potato	cytosol	25.97	23.46
PGSC0003DMT400092060	Potato	cytosol	22.1	22.45
PGSC0003DMT400019151	Potato	cytosol	16.86	22.36
PGSC0003DMT400034384	Potato	mitochondrion	8.66	22.22
PGSC0003DMT400078812	Potato	cytosol	12.3	22.04
PGSC0003DMT400093656	Potato	extracellular	5.69	21.74
PGSC0003DMT400019161	Potato	cytosol	6.83	20.55
PGSC0003DMT400092881	Potato	mitochondrion	17.54	20.48

Protein Annotations

EnsemblPlants:PGSC0003DMT400032641	EnsemblPlantsGene:PGSC0003DMG400012539	EntrezGene:102604755	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF16	PFAM:PF02458	PGSC:PGSC0003DMG400012539	RefSeq:XP_006351850.1	UniParc:UPI0002947EFD	UniProt:M1AXR6
MapMan:50.2.3	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012539]

Coordinates

chr1:-:82231159..82232478

Molecular Weight (calculated)

48989.2 Da

IEP (calculated)

6.250

GRAVY (calculated)

0.022

Length

439 amino acids

Sequence
(BLAST)

001: MAKLEIQIQM RKMIKPSTPT PNHLRSLKLS FFDQGAPRLY VPILFHYLPT GECNRELGII EKCEKLQNSL AETLTSFYPL AGRFMEDKFL IHCNDVGVEY
101: VESKVNMNLA EFLRRGPKIE LLDDLLPEMD QSSSPLLGVQ VNLFNCGGLV MGIQISHIIA DAFTLATFLN EWANTSLTGT TKDCLPSFGH LSSLFPPRVI
201: SAGPQFSLPS IEGPKIITKR FVFDAFAIAN LKDRINPSTA IFTRVVVVMS LIWKVLMGIS SAKHGHSRDS SFVFPINLRG KSKLSSLEHA QGNFYVTVAA
301: TLEANEMRRE LHEFVNAIGS TARNTSLSIG KAASVDEIMS LSINCGTEII NKFVQGDAID IYPSTSWCRF PWYEADFGWG KPMWVSSVGK TFEVISLFDT
401: KDGDGIEAWV SLKENDMLEF ERDTQILAST AFDSSIWIK

Best Arabidopsis Sequence Match ( AT1G24430.1 )
(BLAST)

001: MGLEITVTSQ ELVKPSPRNL NHPPCHHHLS FLDQLAPPIF MPFLFFYHNK TNLSDKERSD HIKSSLSEIL NLYYPLAGRI KNSGDVVVCN DVGVSFVEAK
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS

Arabidopsis Description

F21J9.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.