Factsheet for PGSC0003DMT400060400

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021066	Potato	mitochondrion	62.53	63.85
PGSC0003DMT400021069	Potato	cytosol	48.28	60.34
PGSC0003DMT400094717	Potato	cytosol	14.25	45.93
PGSC0003DMT400018860	Potato	cytosol	33.56	42.82
PGSC0003DMT400064904	Potato	mitochondrion	41.61	41.71
PGSC0003DMT400036505	Potato	plastid	40.69	41.16
PGSC0003DMT400018864	Potato	cytosol, plastid	40.23	40.7
PGSC0003DMT400038710	Potato	plastid	40.92	40.45
PGSC0003DMT400096515	Potato	plastid	40.46	40.27
PGSC0003DMT400086928	Potato	extracellular	14.48	40.13
PGSC0003DMT400093342	Potato	cytosol	31.95	39.15
PGSC0003DMT400018854	Potato	plastid	43.22	38.92
PGSC0003DMT400023800	Potato	cytosol, plastid	34.94	38.87
PGSC0003DMT400060660	Potato	cytosol	32.41	38.63
PGSC0003DMT400091982	Potato	cytosol	31.03	38.46
PGSC0003DMT400088832	Potato	plastid	38.62	38.44
PGSC0003DMT400065716	Potato	plastid	37.47	38.0
PGSC0003DMT400095666	Potato	mitochondrion	22.99	37.88
PGSC0003DMT400067789	Potato	mitochondrion, plastid	37.24	37.41
PGSC0003DMT400041122	Potato	plastid	36.78	37.04
PGSC0003DMT400019092	Potato	mitochondrion, plastid	35.63	36.3
PGSC0003DMT400074128	Potato	mitochondrion	35.17	36.17
PGSC0003DMT400092060	Potato	cytosol	35.4	35.65
PGSC0003DMT400050667	Potato	plastid	25.06	35.16
PGSC0003DMT400019151	Potato	cytosol	26.67	35.05
PGSC0003DMT400067792	Potato	cytosol	25.98	34.14
PGSC0003DMT400092881	Potato	mitochondrion	28.97	33.51
VIT_01s0010g02330.t01	Wine grape	cytosol	30.34	33.17
PGSC0003DMT400093656	Potato	extracellular	8.74	33.04
PGSC0003DMT400019161	Potato	cytosol	10.34	30.82
PGSC0003DMT400044934	Potato	cytosol	30.11	30.47
PGSC0003DMT400078812	Potato	cytosol	17.01	30.2
PGSC0003DMT400097407	Potato	cytosol	8.74	29.01
PGSC0003DMT400032641	Potato	mitochondrion	29.2	28.93
PGSC0003DMT400069353	Potato	cytosol	20.69	28.04
PGSC0003DMT400032637	Potato	cytosol, golgi, mitochondrion, plastid	26.44	27.98
PGSC0003DMT400060369	Potato	cytosol	28.74	27.96
PGSC0003DMT400018015	Potato	cytosol	27.13	27.76
PGSC0003DMT400042163	Potato	cytosol, mitochondrion	27.82	27.69
PGSC0003DMT400069354	Potato	cytosol	9.2	27.4
PGSC0003DMT400042204	Potato	cytosol	27.59	27.4
PGSC0003DMT400062295	Potato	cytosol	27.36	27.17
PGSC0003DMT400018478	Potato	cytosol, endoplasmic reticulum, peroxisome	26.67	27.1
PGSC0003DMT400086558	Potato	plastid	26.21	27.08
PGSC0003DMT400070642	Potato	cytosol	28.97	26.98
PGSC0003DMT400032651	Potato	cytosol	26.67	26.61
PGSC0003DMT400095358	Potato	cytosol	11.95	26.13
PGSC0003DMT400092870	Potato	cytosol	8.74	26.03
PGSC0003DMT400032643	Potato	extracellular	26.67	25.89
PGSC0003DMT400020180	Potato	cytosol, golgi, peroxisome	25.29	25.0
PGSC0003DMT400026730	Potato	plastid	23.45	24.88
PGSC0003DMT400062415	Potato	cytosol	22.3	24.68
PGSC0003DMT400041528	Potato	cytosol, peroxisome, plastid	25.06	24.01
PGSC0003DMT400032639	Potato	cytosol	22.53	23.96
PGSC0003DMT400020175	Potato	cytosol, golgi, plastid	24.37	23.77
PGSC0003DMT400036369	Potato	cytosol	17.24	23.66
PGSC0003DMT400036374	Potato	golgi, nucleus, peroxisome	24.14	23.65
PGSC0003DMT400075205	Potato	cytosol	24.6	23.62
PGSC0003DMT400093404	Potato	cytosol	13.33	23.48
PGSC0003DMT400046325	Potato	peroxisome	21.84	23.34
PGSC0003DMT400030107	Potato	cytosol	15.86	22.92
PGSC0003DMT400070645	Potato	cytosol	21.15	22.83
PGSC0003DMT400034333	Potato	cytosol	20.92	22.81
PGSC0003DMT400036371	Potato	cytosol	21.61	22.65
PGSC0003DMT400034254	Potato	cytosol	17.24	22.59
PGSC0003DMT400036383	Potato	cytosol, extracellular, peroxisome	22.99	22.52
PGSC0003DMT400094682	Potato	cytosol	6.21	22.31
PGSC0003DMT400034385	Potato	cytosol, mitochondrion, peroxisome, plastid	23.22	22.3
PGSC0003DMT400046332	Potato	cytosol	22.76	22.25
PGSC0003DMT400046322	Potato	cytosol	9.2	22.1
PGSC0003DMT400046421	Potato	cytosol, vacuole	20.46	22.08
PGSC0003DMT400046420	Potato	cytosol, peroxisome, plastid	22.99	22.08
PGSC0003DMT400090681	Potato	cytosol	5.06	22.0
PGSC0003DMT400011357	Potato	cytosol	19.77	21.72
PGSC0003DMT400075234	Potato	cytosol	8.05	21.47
PGSC0003DMT400034258	Potato	extracellular, nucleus, peroxisome, plastid	15.17	21.09
PGSC0003DMT400046320	Potato	cytosol	14.48	19.94
PGSC0003DMT400036377	Potato	cytosol	14.25	19.62
PGSC0003DMT400075229	Potato	cytosol	5.75	16.78
PGSC0003DMT400075236	Potato	cytosol	18.39	16.46
PGSC0003DMT400075231	Potato	cytosol	6.44	16.0
PGSC0003DMT400075209	Potato	cytosol, plastid, vacuole	6.9	12.99
PGSC0003DMT400034384	Potato	mitochondrion	4.83	12.28

Protein Annotations

EnsemblPlants:PGSC0003DMT400060400	EnsemblPlantsGene:PGSC0003DMG400023493	EntrezGene:102581513	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	ncoils:Coil
PANTHER:PTHR31623	PANTHER:PTHR31623:SF6	PFAM:PF02458	PGSC:PGSC0003DMG400023493	RefSeq:XP_006345867.1	SEG:seg
UniParc:UPI000295CD75	UniProt:M1C5S9	MapMan:50.2.3	:	:	:

Description

Acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400023493]

Coordinates

chr5:+:50961356..50962907

Molecular Weight (calculated)

48679.8 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.267

Length

435 amino acids

Sequence
(BLAST)

001: MATSSLVSLI SKKIIKPSIQ TPLPLRSHKL SFLDQVFDMS IPFAFFYPKK GGDKSSDEPS HMSQLLESSL SKALSYYYPY AGKIKDDCIV DCNDVGVEVS
101: NVRVHCPMSE ILKHPYTDAE NVAFPQRLPW NHPDQGNLAV AQVSYFDCGG IAVGGCLSHK IGDACTISNF FYNWGILSRD KSVMPSPQFV GESIYPQSND
201: PYVVSTIKPE EPTKYLGKRF VFPAAKVNAL KAKFSFDSGV QNPTRTEVVS TLIYKCALAA RTRNFGSFKQ SSLFQVSYMR ERHNPPLSQD VSGNIVSGFS
301: VETTNERDVN CPRLVSELRN EKEKLDQDKA KAIENAFISE VVDSIEKGRS PFNNDMFDYY FCLSLNAFPL YKTDFGWGKP TRVSLATGPF NRWFHLMDNQ
401: SGGGIEAIIM LGELDMFVFE TDPELLEFAT PIPNH

Best Arabidopsis Sequence Match ( AT4G15390.1 )
(BLAST)

001: METMTMKVET ISKEIIKPSS PTPNNLQTLQ LSIYDHILPP VYTVAFLFYT KNDLISQEHT SHKLKTSLSE TLTKFYPLAG RITGVTVDCT DEGAIFVDAR
101: VNNCPLTEFL KCPDFDALQQ LLPLDVVDNP YVAAATWPLL LVKATYFGCG GMAIGICITH KIADAASIST FIRSWAATAR GENDAAAMES PVFAGANFYP
201: PANEAFKLPA DEQAGKRSSI TKRFVFEASK VEDLRTKAAS EETVDQPTRV ESVTALIWKC FVASSKTTTC DHKVLVQLAN LRSKIPSLLQ ESSIGNLMFS
301: SVVLSIGRGG EVKIEEAVRD LRKKKEELGT VILDEGGSSD SSSMIGSKLA NLMLTNYSRL SYETHEPYTV SSWCKLPLYE ASFGWDSPVW VVGNVSPVLG
401: NLAMLIDSKD GQGIEAFVTL PEENMSSFEQ NPELLAFATM NPSVLV

Arabidopsis Description

HSR201-like protein [Source:UniProtKB/TrEMBL;Acc:O23392]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.