Factsheet for PGSC0003DMT400038710

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036505	Potato	plastid	97.27	99.53
Solyc05g039950.1.1	Tomato	extracellular	77.27	86.08
PGSC0003DMT400088832	Potato	plastid	60.0	60.41
PGSC0003DMT400064904	Potato	mitochondrion	47.27	47.93
PGSC0003DMT400094717	Potato	cytosol	13.41	43.7
PGSC0003DMT400018864	Potato	cytosol, plastid	42.27	43.26
PGSC0003DMT400018860	Potato	cytosol	32.95	42.52
PGSC0003DMT400021069	Potato	cytosol	33.18	41.95
PGSC0003DMT400023800	Potato	cytosol, plastid	36.82	41.43
PGSC0003DMT400021066	Potato	mitochondrion	40.0	41.31
PGSC0003DMT400060400	Potato	plastid	40.45	40.92
PGSC0003DMT400095666	Potato	mitochondrion	24.32	40.53
PGSC0003DMT400086928	Potato	extracellular	14.32	40.13
PGSC0003DMT400065716	Potato	plastid	38.18	39.16
PGSC0003DMT400096515	Potato	plastid	38.86	39.13
PGSC0003DMT400018854	Potato	plastid	42.73	38.92
PGSC0003DMT400093342	Potato	cytosol	30.23	37.46
PGSC0003DMT400050667	Potato	plastid	26.36	37.42
PGSC0003DMT400019092	Potato	mitochondrion, plastid	36.14	37.24
PGSC0003DMT400091982	Potato	cytosol	29.32	36.75
PGSC0003DMT400041122	Potato	plastid	35.91	36.57
PGSC0003DMT400067789	Potato	mitochondrion, plastid	35.45	36.03
PGSC0003DMT400092881	Potato	mitochondrion	30.68	35.9
PGSC0003DMT400060660	Potato	cytosol	29.77	35.89
PGSC0003DMT400074128	Potato	mitochondrion	33.41	34.75
PGSC0003DMT400093656	Potato	extracellular	8.86	33.91
PGSC0003DMT400092060	Potato	cytosol	33.18	33.8
PGSC0003DMT400067792	Potato	cytosol	25.23	33.53
PGSC0003DMT400078812	Potato	cytosol	18.41	33.06
PGSC0003DMT400019151	Potato	cytosol	24.55	32.63
VIT_01s0010g02330.t01	Wine grape	cytosol	29.32	32.41
PGSC0003DMT400069353	Potato	cytosol	22.05	30.22
PGSC0003DMT400019161	Potato	cytosol	10.0	30.14
PGSC0003DMT400044934	Potato	cytosol	28.18	28.84
PGSC0003DMT400069354	Potato	cytosol	9.55	28.77
PGSC0003DMT400018015	Potato	cytosol	27.73	28.71
PGSC0003DMT400018478	Potato	cytosol, endoplasmic reticulum, peroxisome	27.5	28.27
PGSC0003DMT400032641	Potato	mitochondrion	28.18	28.25
PGSC0003DMT400042163	Potato	cytosol, mitochondrion	27.5	27.69
PGSC0003DMT400086558	Potato	plastid	26.36	27.55
PGSC0003DMT400097407	Potato	cytosol	8.18	27.48
PGSC0003DMT400032639	Potato	cytosol	25.45	27.38
PGSC0003DMT400032637	Potato	cytosol, golgi, mitochondrion, plastid	25.45	27.25
PGSC0003DMT400032643	Potato	extracellular	27.5	27.01
PGSC0003DMT400092870	Potato	cytosol	8.86	26.71
PGSC0003DMT400032651	Potato	cytosol	26.14	26.38
PGSC0003DMT400026730	Potato	plastid	24.55	26.34
PGSC0003DMT400075205	Potato	cytosol	27.05	26.27
PGSC0003DMT400042204	Potato	cytosol	26.14	26.26
PGSC0003DMT400062295	Potato	cytosol	25.91	26.03
PGSC0003DMT400062415	Potato	cytosol	22.73	25.45
PGSC0003DMT400046325	Potato	peroxisome	23.41	25.31
PGSC0003DMT400041528	Potato	cytosol, peroxisome, plastid	25.91	25.11
PGSC0003DMT400060369	Potato	cytosol	25.45	25.06
PGSC0003DMT400046322	Potato	cytosol	10.23	24.86
PGSC0003DMT400070642	Potato	cytosol	26.14	24.63
PGSC0003DMT400095358	Potato	cytosol	11.14	24.62
PGSC0003DMT400036369	Potato	cytosol	17.73	24.61
PGSC0003DMT400030107	Potato	cytosol	16.82	24.58
PGSC0003DMT400034254	Potato	cytosol	18.41	24.4
PGSC0003DMT400034385	Potato	cytosol, mitochondrion, peroxisome, plastid	25.0	24.28
PGSC0003DMT400020180	Potato	cytosol, golgi, peroxisome	24.09	24.09
PGSC0003DMT400036371	Potato	cytosol	22.5	23.86
PGSC0003DMT400046420	Potato	cytosol, peroxisome, plastid	24.32	23.62
PGSC0003DMT400046421	Potato	cytosol, vacuole	21.59	23.57
PGSC0003DMT400034333	Potato	cytosol	21.36	23.56
PGSC0003DMT400093404	Potato	cytosol	12.95	23.08
PGSC0003DMT400011357	Potato	cytosol	20.68	22.98
PGSC0003DMT400046332	Potato	cytosol	22.95	22.7
PGSC0003DMT400036374	Potato	golgi, nucleus, peroxisome	22.5	22.3
PGSC0003DMT400020175	Potato	cytosol, golgi, plastid	22.5	22.2
PGSC0003DMT400075234	Potato	cytosol	8.18	22.09
PGSC0003DMT400036383	Potato	cytosol, extracellular, peroxisome	22.27	22.07
PGSC0003DMT400090681	Potato	cytosol	5.0	22.0
PGSC0003DMT400034258	Potato	extracellular, nucleus, peroxisome, plastid	15.45	21.73
PGSC0003DMT400075231	Potato	cytosol	8.64	21.71
PGSC0003DMT400075229	Potato	cytosol	7.05	20.81
PGSC0003DMT400070645	Potato	cytosol	18.64	20.35
PGSC0003DMT400075236	Potato	cytosol	21.36	19.34
PGSC0003DMT400094682	Potato	cytosol	5.23	19.01
PGSC0003DMT400036377	Potato	cytosol	13.64	18.99
PGSC0003DMT400046320	Potato	cytosol	13.64	18.99
PGSC0003DMT400075209	Potato	cytosol, plastid, vacuole	9.55	18.18
PGSC0003DMT400034384	Potato	mitochondrion	5.91	15.2

Protein Annotations

EnsemblPlants:PGSC0003DMT400038710	EnsemblPlantsGene:PGSC0003DMG400014959	EntrezGene:102581935	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF6	PFAM:PF02458	PGSC:PGSC0003DMG400014959	RefSeq:XP_006362683.1	SEG:seg	UniParc:UPI00029503DD
UniProt:M1B797	MapMan:50.2.3	:	:	:	:

Description

Acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400014959]

Coordinates

chr5:-:40814509..40815955

Molecular Weight (calculated)

48864.6 Da

IEP (calculated)

6.055

GRAVY (calculated)

-0.068

Length

440 amino acids

Sequence
(BLAST)

001: MESIAHPLVS IISEKLIKPS SPTCPTKRWH KLSLIDQAFS NSYIPFSLFY TKDAISKNNT QISQLLEESL SKILSIYYPY AGRLKDNTTV DCNDAGAEFV
101: QVRIDCLISE TLNWHNTAIE DLLFPQGLPW SNCTTGGLVV VQLTYFNCGG IAISMCISHK IGDGCSGYNL FRDWSEITSD PNNFSIPSLH YVEQSVFPPP
201: SSGPFLSPLF MSNKHDCVQR RYIFSNEKLL NLLEKILNLK NTVAAESEVQ NPTRTEVVSA LIFKCAVRAA KAKSGIFQPS SIVQAVDLRA LVGLPPNAIG
301: NLLTICPTSI TNNEESMTIS KLVTEMRKSK ELVYKRDNIN DNMFVALLLE LAKSKQEYHD NGPNEYQITS LVKFALHEID FGWGKPTKVS IANGLNNKLA
401: ILMGNQSGGL DAFVTLTEHD MSVFERDTEL LEFASIVPSC

Best Arabidopsis Sequence Match ( AT1G24420.1 )
(BLAST)

001: MEKNVEILSR EIVKPSSPTP DDKRILNLSL LDILSSPMYT GALLFYAADP QNLLGFSTEE TSLKLKKSLS KTLPIFYPLA GRIIGSFVEC NDEGAVFIEA
101: RVDHLLSEFL KCPVPESLEL LIPVEAKSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAESSRGLG ITLIPSFTAS EVFPKPLDEL
201: PSKPMDRKEE VEEMSCVTKR FVFDASKIKK LRAKASRNLV KNPTRVEAVT ALFWRCVTKV SRLSSLTPRT SVLQILVNLR GKVDSLCENT IGNMLSLMIL
301: KNEEAAIERI QDVVDEIRRA KEIFSLNCKE MSKSSSRIFE LLEEIGKVYG RGNEMDLWMS NSWCKLGLYD ADFGWGKPVW VTGRGTSHFK NLMLLIDTKD
401: GEGIEAWITL TEEQMSLFEC DQELLESASL NPPVLI

Arabidopsis Description

F21J9.8 [Source:UniProtKB/TrEMBL;Acc:Q9FYM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.