Factsheet for VIT_01s0010g02320.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g02300.t01	Wine grape	cytosol	37.12	59.7
KRH46964	Soybean	cytosol	52.2	53.07
PGSC0003DMT400042204	Potato	cytosol	47.56	46.8
PGSC0003DMT400044934	Potato	cytosol	46.64	46.74
Solyc05g014330.1.1	Tomato	extracellular	45.94	45.94
KRH28761	Soybean	cytosol	45.48	45.27
VIT_18s0001g00450.t01	Wine grape	cytosol	42.23	40.9
VIT_09s0096g00880.t01	Wine grape	mitochondrion	13.92	34.88
VIT_01s0010g02330.t01	Wine grape	cytosol	31.79	34.42
VIT_00s0606g00010.t01	Wine grape	plastid	15.55	33.67
VIT_01s0010g02340.t01	Wine grape	cytosol, plasma membrane, plastid	14.15	33.52
VIT_03s0038g01330.t01	Wine grape	plastid	32.25	32.4
VIT_03s0017g00870.t01	Wine grape	plastid	31.55	31.85
KRH48085	Soybean	mitochondrion	11.6	28.41

Protein Annotations

EntrezGene:100254574	wikigene:100254574	Gene3D:3.30.559.10	MapMan:50.2.3	InterPro:CAT-like_dom_sf	ProteinID:CBI27536
ProteinID:CBI27536.3	UniProt:D7TAL3	EMBL:FN595754	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0006259	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0015074	GO:GO:0016740	GO:GO:0016747	InterPro:IPR023213	EntrezGene:LOC100254574	wikigene:LOC100254574
PFAM:PF02458	PANTHER:PTHR31623	PANTHER:PTHR31623:SF3	InterPro:Transferase	UniParc:UPI00019829C2	ArrayExpress:VIT_01s0010g02320
EnsemblPlantsGene:VIT_01s0010g02320	EnsemblPlants:VIT_01s0010g02320.t01	RefSeq:XP_002267341	RefSeq:XP_002267341.1	:	:

Description

No Description!

Coordinates

chr1:+:19296065..19297361

Molecular Weight (calculated)

48444.7 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.018

Length

431 amino acids

Sequence
(BLAST)

001: MEEIEVEVIS TDTIKPSSPT PAHLRHFQLS FLDQVLSPIF IPIILFYPMD GDVKVDTIER SIWLKKTLSM TLVQFYPLAG RVKDNLFIDC TDQGVPYFEA
101: QVKCQLSEFI CNPDPMQLSK FVPHALDDIV DIVLAIQVNI FKCGGIAIGV CISHKVADAS SVVTFVNGWA AVARRDTHMV CPQFGLANLF PPINLSGFNP
201: STGMTKEKIL TKRFVFSASS VAALREKYAD QSTTEDLPRR PTRIEALSAL IWSRFVAVTH GMADPKKIYT ILHAVNLRTR MDPPLPENSF GNIIWFAITR
301: PCIDGMKEGK RHALVNQMRE AIEKIDGDYI KKLPEGIKHL NFLKERAERV TKGEIESFRF TSFCRFPVYE ADFGWGKPKW VGSGSLPFKN LVIFIDSSGT
401: NGGIEAWINL VEEDMDKFQG DEELLSFVSP T

Best Arabidopsis Sequence Match ( AT1G24430.1 )
(BLAST)

001: MGLEITVTSQ ELVKPSPRNL NHPPCHHHLS FLDQLAPPIF MPFLFFYHNK TNLSDKERSD HIKSSLSEIL NLYYPLAGRI KNSGDVVVCN DVGVSFVEAK
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS

Arabidopsis Description

F21J9.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.