Factsheet for VIT_01s0010g02300.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g02320.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.7	37.12
KRH46964	Soybean	cytosol	47.39	29.95
Solyc05g014330.1.1	Tomato	extracellular	44.78	27.84
PGSC0003DMT400044934	Potato	cytosol	44.4	27.67
KRH28761	Soybean	cytosol	44.4	27.48
AT1G24430.1	Thale cress	cytosol	44.4	27.36
PGSC0003DMT400042204	Potato	cytosol	44.03	26.94
VIT_18s0001g00450.t01	Wine grape	cytosol	40.67	24.49
VIT_03s0017g00870.t01	Wine grape	plastid	33.58	21.08
VIT_03s0038g01330.t01	Wine grape	plastid	33.58	20.98
VIT_09s0096g00880.t01	Wine grape	mitochondrion	12.69	19.77
VIT_01s0010g02330.t01	Wine grape	cytosol	29.1	19.6
VIT_00s0606g00010.t01	Wine grape	plastid	13.06	17.59
VIT_01s0010g02340.t01	Wine grape	cytosol, plasma membrane, plastid	10.45	15.38
KRH48085	Soybean	mitochondrion	4.48	6.82

Protein Annotations

ArrayExpress:VIT_01s0010g02300	EMBL:FN595754	EnsemblPlants:VIT_01s0010g02300.t01	EnsemblPlantsGene:VIT_01s0010g02300	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31623	PANTHER:PTHR31623:SF3	PFAM:PF02458	ProteinID:CBI27534	ProteinID:CBI27534.3	SEG:seg
UniParc:UPI0001BE2AB9	UniProt:D7TAL1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1:+:19281786..19282972

Molecular Weight (calculated)

30752.0 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.232

Length

268 amino acids

Sequence
(BLAST)

001: MINLCDYINI LHIEVEEGGV ERCRRLKESL SEILVRFYPL AGRVRDDALV ECNDEGVPYS KAKVNCQLAA ISPRRPTRIE VLSAFIWSHF VAATHGKTDP
101: ERIYTMLHSV NLRTRMDPPL PENYFGNVSR LAIATPCMDS EKECHDFVNH MRDAISKING DYVRKLQEGY GYLNFMKKRT ESVSKGEVVS FTFTSLCRFP
201: LYEGDFGWGK PVWVGSASLL FKNLVVYMDN GIGREIETWV NLKEVDMAKF QEDKEFLSFV SRILDAKL

Best Arabidopsis Sequence Match ( AT1G24430.1 )
(BLAST)

001: MGLEITVTSQ ELVKPSPRNL NHPPCHHHLS FLDQLAPPIF MPFLFFYHNK TNLSDKERSD HIKSSLSEIL NLYYPLAGRI KNSGDVVVCN DVGVSFVEAK
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS

Arabidopsis Description

F21J9.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.