Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g014330.1.1 | Tomato | extracellular | 44.83 | 45.24 |
| KRH46964 | Soybean | cytosol | 43.91 | 45.05 |
| PGSC0003DMT400044934 | Potato | cytosol | 43.91 | 44.42 |
| VIT_01s0010g02300.t01 | Wine grape | cytosol | 27.36 | 44.4 |
| PGSC0003DMT400042204 | Potato | cytosol | 44.37 | 44.06 |
| KRH28761 | Soybean | cytosol | 42.99 | 43.19 |
| AT3G26040.1 | Thale cress | cytosol | 34.94 | 34.39 |
| AT4G15390.1 | Thale cress | cytosol | 34.48 | 33.63 |
| AT1G24420.1 | Thale cress | cytosol | 33.56 | 33.49 |
| AT5G47950.1 | Thale cress | cytosol | 32.41 | 33.1 |
| AT3G30280.1 | Thale cress | cytosol | 33.56 | 32.96 |
| AT4G15400.1 | Thale cress | cytosol | 30.34 | 30.34 |
| AT5G47980.1 | Thale cress | cytosol | 28.97 | 28.44 |
| AT5G23970.1 | Thale cress | cytosol | 27.82 | 28.27 |
| KRH48085 | Soybean | mitochondrion | 9.89 | 24.43 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:50.2.3 | EntrezGene:839059 | ProteinID:AAF97979.1 | ProteinID:AEE30529.1 | ArrayExpress:AT1G24430 |
| EnsemblPlantsGene:AT1G24430 | RefSeq:AT1G24430 | TAIR:AT1G24430 | RefSeq:AT1G24430-TAIR-G | EnsemblPlants:AT1G24430.1 | TAIR:AT1G24430.1 |
| Unigene:At.41434 | InterPro:CAT-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016747 |
| InterPro:IPR023213 | RefSeq:NP_173852.4 | PFAM:PF02458 | PO:PO:0009005 | PO:PO:0020100 | PANTHER:PTHR31623 |
| PANTHER:PTHR31623:SF3 | UniProt:Q9FYM0 | InterPro:Transferase | UniParc:UPI00000A86DC | SEG:seg | : |
Description
F21J9.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYM0]
Coordinates
chr1:-:8658003..8659514
Molecular Weight (calculated)
49291.0 Da
IEP (calculated)
5.614
GRAVY (calculated)
-0.183
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLEITVTSQ ELVKPSPRNL NHPPCHHHLS FLDQLAPPIF MPFLFFYHNK TNLSDKERSD HIKSSLSEIL NLYYPLAGRI KNSGDVVVCN DVGVSFVEAK
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.