Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39174 | Canola | mitochondrion | 85.97 | 82.79 |
| Bra017337.1-P | Field mustard | mitochondrion | 85.07 | 81.92 |
| CDY04190 | Canola | mitochondrion | 84.84 | 81.7 |
| AT1G24420.1 | Thale cress | cytosol | 39.37 | 39.91 |
| AT4G15390.1 | Thale cress | cytosol | 37.33 | 37.0 |
| AT5G47950.1 | Thale cress | cytosol | 34.16 | 35.45 |
| AT3G30280.1 | Thale cress | cytosol | 35.52 | 35.44 |
| KRH10465 | Soybean | cytosol | 34.84 | 35.16 |
| AT5G47980.1 | Thale cress | cytosol | 35.07 | 34.99 |
| AT1G24430.1 | Thale cress | cytosol | 34.39 | 34.94 |
| AT4G15400.1 | Thale cress | cytosol | 34.16 | 34.71 |
| AT5G23970.1 | Thale cress | cytosol | 32.81 | 33.88 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:50.2.3 | EntrezGene:822201 | ProteinID:AEE77107.1 | ArrayExpress:AT3G26040 | EnsemblPlantsGene:AT3G26040 |
| RefSeq:AT3G26040 | TAIR:AT3G26040 | RefSeq:AT3G26040-TAIR-G | EnsemblPlants:AT3G26040.1 | TAIR:AT3G26040.1 | Unigene:At.50226 |
| InterPro:CAT-like_dom_sf | UniProt:F4JBC7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009735 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR023213 | RefSeq:NP_189233.1 | PFAM:PF02458 |
| PO:PO:0000293 | PO:PO:0009005 | PANTHER:PTHR31623 | PANTHER:PTHR31623:SF15 | InterPro:Transferase | UniParc:UPI000016354E |
| SEG:seg | : | : | : | : | : |
Description
HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBC7]
Coordinates
chr3:+:9519741..9521094
Molecular Weight (calculated)
48707.7 Da
IEP (calculated)
9.133
GRAVY (calculated)
-0.065
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVDVVSRDI IKPSSPTPNH LKKFKLSLLE QLGPTIFGPM VFFYSANNSI KPTEQLQMLK KSLSETLTHF YPLAGRLKGN ISIDCNDSGA DFLEARVNSP
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL
101: LSNLLLEPSS DSLQQLIPTS VDSIETRTRL LLAQASFFEC GSMSIGVCIS HKLADATSIG LFMKSWAAIS SRGSIKTIGA PVFDTVKIFP PGNFSETSPA
201: PVVEPEIMMN QTLSKRFIFD SSSIQALQAK ASSFEVNQPT RVEAVSALIW KSAMKATRTV SGTSKPSILA NSVSLRSRVS PPFTKNSIGN LVSYFAAKAE
301: EGINQTKLQT LVSKIRKAKQ RFRDIHIPKL VGNPNATEII CSYQKEAGDM IASGDFDFYI FSSACRFGLY ETDFGWGKPV WVGFPSVRQK NIVTLLDTKE
401: AGGIEAWVNL NEQEMNLFEQ DRELLQFASL NPSVIQPFLH VL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.