Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G30280.1 | Thale cress | cytosol | 78.25 | 78.78 |
| CDY22927 | Canola | cytosol | 76.68 | 78.08 |
| CDY68964 | Canola | cytosol, peroxisome, plastid | 75.34 | 77.6 |
| Bra039555.1-P | Field mustard | cytosol | 76.01 | 77.4 |
| AT5G47950.1 | Thale cress | cytosol | 60.09 | 62.91 |
| AT1G24420.1 | Thale cress | cytosol | 39.91 | 40.83 |
| AT5G23970.1 | Thale cress | cytosol | 37.0 | 38.55 |
| AT4G15400.1 | Thale cress | cytosol | 36.77 | 37.7 |
| AT3G26040.1 | Thale cress | cytosol | 37.0 | 37.33 |
| AT5G47980.1 | Thale cress | cytosol | 35.43 | 35.67 |
| AT1G24430.1 | Thale cress | cytosol | 33.63 | 34.48 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:50.2.3 | EntrezGene:827205 | ProteinID:AEE83591.1 | ProteinID:ANM67668.1 | ArrayExpress:AT4G15390 |
| EnsemblPlantsGene:AT4G15390 | RefSeq:AT4G15390 | TAIR:AT4G15390 | RefSeq:AT4G15390-TAIR-G | EnsemblPlants:AT4G15390.1 | TAIR:AT4G15390.1 |
| EMBL:AY099752 | EMBL:AY128867 | Unigene:At.26884 | ProteinID:CAB10318.1 | ProteinID:CAB78581.1 | InterPro:CAT-like_dom_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR023213 | RefSeq:NP_001329485.1 |
| RefSeq:NP_193274.1 | UniProt:O23392 | PFAM:PF02458 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0009005 |
| PO:PO:0020100 | PANTHER:PTHR31623 | PANTHER:PTHR31623:SF15 | InterPro:Transferase | UniParc:UPI0000039701 | SEG:seg |
Description
HSR201-like protein [Source:UniProtKB/TrEMBL;Acc:O23392]
Coordinates
chr4:-:8792707..8794433
Molecular Weight (calculated)
48770.4 Da
IEP (calculated)
4.830
GRAVY (calculated)
-0.009
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: METMTMKVET ISKEIIKPSS PTPNNLQTLQ LSIYDHILPP VYTVAFLFYT KNDLISQEHT SHKLKTSLSE TLTKFYPLAG RITGVTVDCT DEGAIFVDAR
101: VNNCPLTEFL KCPDFDALQQ LLPLDVVDNP YVAAATWPLL LVKATYFGCG GMAIGICITH KIADAASIST FIRSWAATAR GENDAAAMES PVFAGANFYP
201: PANEAFKLPA DEQAGKRSSI TKRFVFEASK VEDLRTKAAS EETVDQPTRV ESVTALIWKC FVASSKTTTC DHKVLVQLAN LRSKIPSLLQ ESSIGNLMFS
301: SVVLSIGRGG EVKIEEAVRD LRKKKEELGT VILDEGGSSD SSSMIGSKLA NLMLTNYSRL SYETHEPYTV SSWCKLPLYE ASFGWDSPVW VVGNVSPVLG
401: NLAMLIDSKD GQGIEAFVTL PEENMSSFEQ NPELLAFATM NPSVLV
101: VNNCPLTEFL KCPDFDALQQ LLPLDVVDNP YVAAATWPLL LVKATYFGCG GMAIGICITH KIADAASIST FIRSWAATAR GENDAAAMES PVFAGANFYP
201: PANEAFKLPA DEQAGKRSSI TKRFVFEASK VEDLRTKAAS EETVDQPTRV ESVTALIWKC FVASSKTTTC DHKVLVQLAN LRSKIPSLLQ ESSIGNLMFS
301: SVVLSIGRGG EVKIEEAVRD LRKKKEELGT VILDEGGSSD SSSMIGSKLA NLMLTNYSRL SYETHEPYTV SSWCKLPLYE ASFGWDSPVW VVGNVSPVLG
401: NLAMLIDSKD GQGIEAFVTL PEENMSSFEQ NPELLAFATM NPSVLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.