CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22927	Canola	cytosol	95.84	94.75
AT4G15390.1	Thale cress	cytosol	77.6	75.34
AT3G30280.1	Thale cress	cytosol	76.44	74.72
CDY68340	Canola	cytosol	13.39	61.05
CDY52590	Canola	cytosol	55.89	55.5
CDY68339	Canola	cytosol	40.18	54.72
CDX84944	Canola	cytosol	39.72	39.63
CDY27594	Canola	cytosol	39.72	39.54
CDY60221	Canola	cytosol	36.95	37.65
CDX73371	Canola	cytosol	1.39	37.5
CDY58243	Canola	cytosol	33.49	37.08
CDY69720	Canola	cytosol	36.49	36.83
CDX87148	Canola	cytosol	35.8	36.13
CDY22928	Canola	cytosol	36.49	35.35
CDY57231	Canola	cytosol	36.03	34.9
CDY25643	Canola	cytosol	34.41	34.17
CDX89532	Canola	cytosol	33.95	33.79
CDY39174	Canola	mitochondrion	35.8	33.77
CDY25648	Canola	cytosol	33.72	33.56
CDY04190	Canola	mitochondrion	35.57	33.55

Protein Annotations

EnsemblPlants:CDY68964	EnsemblPlantsGene:GSBRNA2T00081497001	Gene3D:3.30.559.10	GO:A0A078JQ95	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	ncoils:Coil
PANTHER:PTHR31623	PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY68964	ProteinID:CDY68964.1	UniParc:UPI0003E6F135
UniProt:A0A078JQ95	MapMan:50.2.3	:	:	:	:

Description

BnaC01g42060DBnaC01g42060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQ95]

Coordinates

chrLK038359:+:2086..3507

Molecular Weight (calculated)

47804.1 Da

IEP (calculated)

4.823

GRAVY (calculated)

-0.078

Length

433 amino acids

Sequence
(BLAST)

001: MKVETIKPSS TTPDDLRTLQ LSIYDHFLPP IYTVAYLFYT KDELMISPEH TSHKLKTSLS ETLTKFYPLA GRINGVTVDC NDEGAVFVDA RVDNCSLSGF
101: LASPDLNALQ QLLPLDAVQN PYEAASTWPL LLVKATYFQC GGMAIGVCIT HKIADAASMS TFIRTWSAEA RGEAGNTVMD PKFSAANFYP PANDTYKLPV
201: DEKANKRSSI TKRFVFGASK LEELRTKATS PESADIPTRV ESVTALLWKC FVFASSLDTC GRKVLIQLAD LRSKLPSLLP ESLIGNVMFS SVVLSTAQGE
301: EVKIEEATRD LRKKREDLQT MIQDEDGSSS MIGSKLANLM LTNYARMSYE THEPYTVSSW CRLPLYEASF GWGYPVWVVG NVAPTFENIA MLIDSKDGHG
401: IEAFVTLPEE NMSSLEQNSE LLAFASLNPC VLV

Best Arabidopsis Sequence Match ( AT3G30280.1 )
(BLAST)

001: METMKVETIA KEIIKPSSTT PNDLQTLQLS IYDHILPPVY TVAFLFYTKD DLISPEQSSH KLKTSLAETL TKFYPLAGRI KGVTIDCNDE GAVFVDARVN
101: NYPLSDFLRS PDFKTLQQLL PLDVIDDPYE AATTWPLLLV KATYFPCGGM AIGLCITHKI ADATSISTFI QSWAAMARGE AGDIVADPVF AAANFYPPAN
201: ELFKFPVDEN ANKISQITKR FVFSASKLEE LRTKAASEDF VGRPKRVESV TALLWKAFVA AASSNTNACD MKVLIQPSNL RPKIPSLLAE SLIGNIMFSS
301: VVLGISQQEE IKIEKAVRDL RKQGDDLQNV IKEEGGSSSA MIGSKLANLM LTNYSKLSYE THEPYTVSSW CKLPLYEASF GWGSPVWIAG NVAPMLENVT
401: MLIDSKDGQG IEAFVTLPEE NMLSLEQNTE LLAFASVNPS VLV

Arabidopsis Description

Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LI71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.