CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012794.1-P	Field mustard	cytosol	95.65	84.23
CDX73371	Canola	cytosol	3.32	81.25
CDY22928	Canola	cytosol	79.8	69.8
CDY57231	Canola	cytosol	78.26	68.46
CDY25643	Canola	cytosol	60.87	54.59
CDY25648	Canola	cytosol	59.59	53.56
CDX89532	Canola	cytosol	59.08	53.1
CDX87148	Canola	cytosol	45.78	41.72
CDY60221	Canola	cytosol	45.27	41.65
CDY69720	Canola	cytosol	45.27	41.26
CDY27594	Canola	cytosol	43.22	38.85
CDX84944	Canola	cytosol	42.46	38.25
CDY68340	Canola	cytosol	8.7	35.79
CDY22927	Canola	cytosol	37.85	33.79
CDY68964	Canola	cytosol, peroxisome, plastid	37.08	33.49
CDY68339	Canola	cytosol	26.6	32.7
CDY52590	Canola	cytosol	36.32	32.57
CDY39174	Canola	mitochondrion	36.06	30.72
CDY04190	Canola	mitochondrion	35.55	30.28

Protein Annotations

EnsemblPlants:CDY58243	EnsemblPlantsGene:GSBRNA2T00023297001	Gene3D:3.30.559.10	GO:A0A078J5K4	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY58243	ProteinID:CDY58243.1	UniParc:UPI0004EF0D16	UniProt:A0A078J5K4
MapMan:50.2.3	:	:	:	:	:

Description

BnaA03g57990DBnaA03g57990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5K4]

Coordinates

chrLK033649:+:14927..16578

Molecular Weight (calculated)

43399.5 Da

IEP (calculated)

5.527

GRAVY (calculated)

0.050

Length

391 amino acids

Sequence
(BLAST)

001: MELKLEVTGR EVIKPSSPAP HHDRLQLSLF DLSCPAIYVA TTFFFKSITG SESLEFISRR LKTSLSETLS RFPPLAGRLE GISVYCNDEG VIFTEARTVL
101: LLSDFLRNLN RPVHSLAEFL PEVEQGESAG TWPLLRVMVS FFGSGSGVAV TVGISHQICD AASLLNFVRA WADTAKGTAT SVPLRGKCVT KRLVFESSKI
201: AELKLKAASE SVPVPTRVEA IMSLIWRCAA KASRSNSLSP KSTLMTQAMD LRLRIPTNVL PENAMGNLQS AFFLKREAES ELEIGEIVAE FRKIKEGVNE
301: MIKENLQGYL YTMSSWCRKP FYEVDFGWGN PVWIGPASHN IYDNIVFVVL MDSKDGEDVE AWVGIPKQDM ATFLCDEELL SYAIINPPVL M

Best Arabidopsis Sequence Match ( AT4G15390.1 )
(BLAST)

001: METMTMKVET ISKEIIKPSS PTPNNLQTLQ LSIYDHILPP VYTVAFLFYT KNDLISQEHT SHKLKTSLSE TLTKFYPLAG RITGVTVDCT DEGAIFVDAR
101: VNNCPLTEFL KCPDFDALQQ LLPLDVVDNP YVAAATWPLL LVKATYFGCG GMAIGICITH KIADAASIST FIRSWAATAR GENDAAAMES PVFAGANFYP
201: PANEAFKLPA DEQAGKRSSI TKRFVFEASK VEDLRTKAAS EETVDQPTRV ESVTALIWKC FVASSKTTTC DHKVLVQLAN LRSKIPSLLQ ESSIGNLMFS
301: SVVLSIGRGG EVKIEEAVRD LRKKKEELGT VILDEGGSSD SSSMIGSKLA NLMLTNYSRL SYETHEPYTV SSWCKLPLYE ASFGWDSPVW VVGNVSPVLG
401: NLAMLIDSKD GQGIEAFVTL PEENMSSFEQ NPELLAFATM NPSVLV

Arabidopsis Description

HSR201-like protein [Source:UniProtKB/TrEMBL;Acc:O23392]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.