CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030190.1-P	Field mustard	cytosol	96.78	96.78
CDY25648	Canola	cytosol	96.78	96.78
CDY25643	Canola	cytosol	77.01	76.83
CDX73371	Canola	cytosol	2.53	68.75
AT4G15400.1	Thale cress	cytosol	62.53	62.53
CDY58243	Canola	cytosol	53.1	59.08
CDY22928	Canola	cytosol	60.23	58.61
CDY57231	Canola	cytosol	58.85	57.27
CDY60221	Canola	cytosol	38.85	39.76
CDX87148	Canola	cytosol	37.93	38.46
CDY27594	Canola	cytosol	37.7	37.7
CDY69720	Canola	cytosol	36.78	37.3
CDX84944	Canola	cytosol	36.78	36.87
CDY22927	Canola	cytosol	34.25	34.02
CDY68964	Canola	cytosol, peroxisome, plastid	33.79	33.95
CDY68340	Canola	cytosol	7.13	32.63
CDY52590	Canola	cytosol	30.11	30.05
CDY68339	Canola	cytosol	21.84	29.87
CDY39174	Canola	mitochondrion	31.49	29.85
CDY04190	Canola	mitochondrion	31.49	29.85

Protein Annotations

EnsemblPlants:CDX89532	EnsemblPlantsGene:GSBRNA2T00149833001	Gene3D:3.30.559.10	GO:A0A078DL07	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDX89532	ProteinID:CDX89532.1	SEG:seg	UniParc:UPI0004EEF6A4
MapMan:50.2.3	:	:	:	:	:

Description

BnaC04g35510D

Coordinates

chrLK031859:-:877832..879139

Molecular Weight (calculated)

47538.3 Da

IEP (calculated)

6.186

GRAVY (calculated)

0.002

Length

435 amino acids

Sequence
(BLAST)

001: MDLEIEVMGR EVIKPATPSP HNHIQLSLLD MSIPAMYFST IFLYKSEGLV TASPEIISKK LKSSLSETLS RLYPLAGEIE GVSINCNDKG AVFTQARTNL
101: LLPEFLKTLN VDSLAELRPK IEDGDSPSGW PLLSVGVTFF GSGSGVAVSV NVSHRICDAA SLLTLVTDWS DTMANKKSNV GTHQFAEATI YPPAPPHMAS
201: QSRTTNSIKC AMNRFVFESS KIAELKRKAA SESVKMPTRV EAITSLIWKC VTKASRSNLM GPRSAVMYVA VDLRLKVPSS VLSPDAIGNL QTAFFLKKDA
301: QSEVEIQETV AAFRTAKEEV DKMLKDNVQR NTLGQGLLNM MGSQASVFKP DIDIYTTSSW LGKPFYGVDF GWGSPVWMGS ATHTVYDKLV YVSLIDSKDG
401: EGVEAWINIP AEVMSVFVHD QELLAYAVLN PPITI

Best Arabidopsis Sequence Match ( AT4G15400.1 )
(BLAST)

001: MEAKLEVTGK EVIKPASPSP RDRLQLSILD LYCPGIYVST IFFYDLITES SEVFSENLKL SLSETLSRFY PLAGRIEGLS ISCNDEGAVF TEARTDLLLP
101: DFLRNLNTDS LSGFLPTLAA GESPAAWPLL SVKVTFFGSG SGVAVSVSVS HKICDIASLV TFVKDWATTT AKGKSNSTIE FAETTIYPPP PSHMYEQFPS
201: TDSDSNITSK YVLKRFVFEP SKIAELKHKA ASESVPVPTR VEAIMSLIWR CARNSSRSNL LIPRQAVMWQ AMDIRLRIPS SVAPKDVIGN LQSGFSLKKD
301: AESEFEIPEI VATFRKNKER VNEMIKESLQ GNTIGQSLLS LMAETVSEST EIDRYIMSSW CRKPFYEVDF GSGSPVWVGY ASHTIYDNMV GVVLIDSKEG
401: DGVEAWISLP EEDMSVFVDD QELLAYAVLN PPVVA

Arabidopsis Description

BIA1BAHD acyltransferase BIA1 [Source:UniProtKB/Swiss-Prot;Acc:O23393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.