CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026472.1-P	Field mustard	cytosol	97.9	97.9
CDX87148	Canola	cytosol	96.5	96.5
AT5G23970.1	Thale cress	cytosol	77.62	77.8
CDX73371	Canola	cytosol	2.56	68.75
CDY60221	Canola	cytosol	55.24	55.76
CDY58243	Canola	cytosol	41.26	45.27
CDY68340	Canola	cytosol	9.56	43.16
CDY22928	Canola	cytosol	43.12	41.39
CDY57231	Canola	cytosol	43.12	41.39
CDY25643	Canola	cytosol	39.86	39.22
CDX84944	Canola	cytosol	39.16	38.71
CDY27594	Canola	cytosol	38.93	38.39
CDY25648	Canola	cytosol	37.53	37.01
CDX89532	Canola	cytosol	37.3	36.78
CDY22927	Canola	cytosol	37.3	36.53
CDY68964	Canola	cytosol, peroxisome, plastid	36.83	36.49
CDY52590	Canola	cytosol	36.13	35.55
CDY68339	Canola	cytosol	24.94	33.65
CDY39174	Canola	mitochondrion	31.93	29.85
CDY04190	Canola	mitochondrion	31.47	29.41

Protein Annotations

EnsemblPlants:CDY69720	EnsemblPlantsGene:GSBRNA2T00091832001	Gene3D:3.30.559.10	GO:A0A078JTF3	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	ncoils:Coil
PANTHER:PTHR31623	PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY69720	ProteinID:CDY69720.1	UniParc:UPI0004EDFA2F
UniProt:A0A078JTF3	MapMan:50.2.3	:	:	:	:

Description

BnaAnng31320DBnaAnng31320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTF3]

Coordinates

chrLK040163:-:1707..2996

Molecular Weight (calculated)

47940.7 Da

IEP (calculated)

5.988

GRAVY (calculated)

-0.090

Length

429 amino acids

Sequence
(BLAST)

001: MAMKLEILGK EVIKPDSPNH LQTLHLSLFD QFLPSTYVSA IFFYDDQPNQ EEILVHRLKN SLSQTLSLFY PLAGRIKEGV VVDCNDEGAL FIKERADVLL
101: SDVLRNPSDA DLVHKLIVSP DHADPGTWPL LHVKVVFFRD RGFAVAVSAS HKVCDAASLS MFVRSWTKAA KGFADTVNPE FAASVFYPPA DISVEFPPLL
201: EHKTKSKTKS FVFGPLMMEK LKSRASCGLL APQATRVESI TALLLRCMTK ARRPKTEAVT EFAITHTMNL RPRVPLSCLP HKSIGNFFFL PLLKETSESK
301: MDIQETVSKL RKTKEELNEL ITKDSNSDEA KERITSAMLS FLCEVSPEAV TYAVSSWCRM SFYEADFGWG FPVWVAPGSV DKTQVVLMDA KDGEGVEAWV
401: TLPETDMAEF EHDDELLVYG IPSPSVRTK

Best Arabidopsis Sequence Match ( AT5G23970.1 )
(BLAST)

001: MKLELLSKEV IKPASPNHLQ TLSLSLFDQF LPSTYVSAIF FYDDHSNQED IQRLKSSLSQ TLSLFYPLAG QIKDGVTVHC NDEGALFTEA RAEIFLSDFL
101: RNPSDADLIQ KFIVSPDHAD PETWPLLHVK VIFFKDKGFA VAVSVSHKIC DAASLSTFVC SWTKASKGYA DTVDPEFVGA DFYPPADISI EFPPLLVHET
201: KSKTKRFVFG SLMIEKLKNR ASSGKRVPQA TRIESITALL LRCMTKAGHS KSGKVKEFAI TQTMDLRPRV SSSLLPHKAI GNFFFLPLLK ESSESKMEIE
301: ETVSKLQKTK QELNELIRND SEDAKSSVEA KERIASAMLS SLCEISPEME TYAVSSWCRM SFYEANFGWG KPVWVAPDSV DKTQVVLMDS KDSEGVEARV
401: TLPETDMAKY EHDSELLVYA TPSPSILI

Arabidopsis Description

Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FLW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.