CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030195.1-P	Field mustard	cytosol	98.17	99.77
CDX89532	Canola	cytosol	76.83	77.01
CDY25648	Canola	cytosol	75.92	76.09
CDX73371	Canola	cytosol	2.75	75.0
AT4G15400.1	Thale cress	cytosol	63.76	63.91
CDY58243	Canola	cytosol	54.59	60.87
CDY22928	Canola	cytosol	61.47	59.96
CDY57231	Canola	cytosol	60.09	58.61
CDX87148	Canola	cytosol	39.45	40.09
CDY60221	Canola	cytosol	38.99	40.0
CDY69720	Canola	cytosol	39.22	39.86
CDY27594	Canola	cytosol	38.53	38.62
CDX84944	Canola	cytosol	37.39	37.56
CDY68340	Canola	cytosol	8.03	36.84
CDY22927	Canola	cytosol	34.63	34.47
CDY68964	Canola	cytosol, peroxisome, plastid	34.17	34.41
CDY04190	Canola	mitochondrion	32.8	31.15
CDY39174	Canola	mitochondrion	32.57	30.94
CDY52590	Canola	cytosol	30.73	30.73
CDY68339	Canola	cytosol	21.33	29.25

Protein Annotations

EnsemblPlants:CDY25643	EnsemblPlantsGene:GSBRNA2T00032934001	Gene3D:3.30.559.10	GO:A0A078GM11	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY25643	ProteinID:CDY25643.1	SEG:seg	UniParc:UPI0004EE08AE
UniProt:A0A078GM11	MapMan:50.2.3	:	:	:	:

Description

BnaA04g13350DBnaA04g13350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM11]

Coordinates

chrLK032177:-:551136..552446

Molecular Weight (calculated)

48221.3 Da

IEP (calculated)

6.936

GRAVY (calculated)

-0.042

Length

436 amino acids

Sequence
(BLAST)

001: MDLKLEVMGR EVVKPATPSP HDHLQLSLVD FSCPAVYVSI MFLYKSEELV TASPEIISNK LKCSLSETLS RFYPLAGEIE GVSINCNDKG AVFTQARTHL
101: LLPEVLKNRN VNSLEELYPK IEAGDSPTKW PLLSAHITFF GSGSGVAVSV CISHRICDAS SLHMLLTDWA ATTANKKSNV STHQFAEATI YPPAPPHMAL
201: LHPPTMDLKK CIMNRFVFES SKIAELKRKA ASQSVPMPTR VEAITSVIWK CATNASRSNL VAPRSTLMYQ AMDLRIRLPS NVLSHDTIGN LQTAFFLKKD
301: AESKLEISET VASFRTAKER LNKMLKDNVQ GNTVGKGLLS VMGSCMSEFK PDIDIYTMSS WCGKPFYEVD FGWGSPFWMG SPSRTIYDNM VYIALMDSKD
401: GGGVEAWISL PAEDMSVFVH DQELLAYAVL NPPVHI

Best Arabidopsis Sequence Match ( AT4G15400.1 )
(BLAST)

001: MEAKLEVTGK EVIKPASPSP RDRLQLSILD LYCPGIYVST IFFYDLITES SEVFSENLKL SLSETLSRFY PLAGRIEGLS ISCNDEGAVF TEARTDLLLP
101: DFLRNLNTDS LSGFLPTLAA GESPAAWPLL SVKVTFFGSG SGVAVSVSVS HKICDIASLV TFVKDWATTT AKGKSNSTIE FAETTIYPPP PSHMYEQFPS
201: TDSDSNITSK YVLKRFVFEP SKIAELKHKA ASESVPVPTR VEAIMSLIWR CARNSSRSNL LIPRQAVMWQ AMDIRLRIPS SVAPKDVIGN LQSGFSLKKD
301: AESEFEIPEI VATFRKNKER VNEMIKESLQ GNTIGQSLLS LMAETVSEST EIDRYIMSSW CRKPFYEVDF GSGSPVWVGY ASHTIYDNMV GVVLIDSKEG
401: DGVEAWISLP EEDMSVFVDD QELLAYAVLN PPVVA

Arabidopsis Description

BIA1BAHD acyltransferase BIA1 [Source:UniProtKB/Swiss-Prot;Acc:O23393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.